RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CDC6Q99741 560 aa7.18□□□□□ -1.26
CHD9-220ENST00000569794 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
CHD9-220ENST00000569794 DNM2P50570 870 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 SLC25A3Q00325 362 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 FAM209AQ5JX71 171 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 NOSTRINQ8IVI9 506 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 BCL6BQ8N143 479 aaPredicted RBP7.17□□□□□ -1.26
CHD9-220ENST00000569794 ANKRD35Q8N283 1001 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 CTDP1Q9Y5B0 961 aaPredicted RBP7.17□□□□□ -1.26
CHD9-220ENST00000569794 PCDHA9Q9Y5H5 950 aa7.17□□□□□ -1.26
CHD9-220ENST00000569794 MAFO75444 373 aaPredicted RBP7.16□□□□□ -1.26
CHD9-220ENST00000569794 GABREP78334 506 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 COL10A1Q03692 680 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 FOXB2Q5VYV0 432 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 ZC3H7AQ8IWR0 971 aaKnown RBP7.16□□□□□ -1.26
CHD9-220ENST00000569794 SLC43A3Q8NBI5 491 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 RABGGTAQ92696 567 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 TTPALQ9BTX7 342 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
CHD9-220ENST00000569794 A0A1W2PRX2 142 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 RASSF10A6NK89 507 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 E9PSI1 815 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 SCDO00767 359 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 FOXN1O15353 648 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 CRTAMO95727 393 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 SCNN1GP51170 649 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 ADAM15Q13444 863 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 FSTL4Q6MZW2 842 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 HIPK4Q8NE63 616 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 GBP4Q96PP9 640 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 KCNH7Q9NS40 1196 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 VWA7Q9Y334 891 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
CHD9-220ENST00000569794 FOXP2O15409 715 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
CHD9-220ENST00000569794 STAT3P40763 770 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 Q6ZRM9 215 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 CISD2Q8N5K1 135 aaKnown RBP7.14□□□□□ -1.27
CHD9-220ENST00000569794 ZBTB38Q8NAP3 1195 aaPredicted RBP7.14□□□□□ -1.27
CHD9-220ENST00000569794 IPO9Q96P70 1041 aaKnown RBP7.14□□□□□ -1.27
CHD9-220ENST00000569794 TRIM55Q9BYV6 548 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 GPRC5BQ9NZH0 403 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
CHD9-220ENST00000569794 APEX1P27695 318 aaKnown RBP7.13□□□□□ -1.27
CHD9-220ENST00000569794 ADCY7P51828 1080 aa7.13□□□□□ -1.27
CHD9-220ENST00000569794 ZC3H6P61129 1189 aaKnown RBP7.13□□□□□ -1.27
CHD9-220ENST00000569794 ATP2C1P98194 919 aaPredicted RBP7.13□□□□□ -1.27
CHD9-220ENST00000569794 RPUSD2Q8IZ73 545 aaKnown RBP7.13□□□□□ -1.27
CHD9-220ENST00000569794 CALML6Q8TD86 181 aa7.13□□□□□ -1.27
CHD9-220ENST00000569794 LPPQ93052 612 aa7.13□□□□□ -1.27
CHD9-220ENST00000569794 MIEF2Q96C03 454 aa7.13□□□□□ -1.27
CHD9-220ENST00000569794 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 PDPK1O15530 556 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 SSRP1Q08945 709 aaKnown RBP7.12□□□□□ -1.27
CHD9-220ENST00000569794 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
CHD9-220ENST00000569794 LAIR1Q6GTX8 287 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 DPY19L2P1Q6NXN4 242 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 DLG3Q92796 817 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 EXOC2Q96KP1 924 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 PFDN2Q9UHV9 154 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 B3GALT1Q9Y5Z6 326 aa7.12□□□□□ -1.27
CHD9-220ENST00000569794 PCSK5Q92824 1860 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 TMEM191CA6NGB0 347 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 SDHAP31040 664 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 RASGRF1Q13972 1273 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 TOB2Q14106 344 aaPredicted RBP7.11□□□□□ -1.27
CHD9-220ENST00000569794 MTERF2Q49AM1 385 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 KLHDC10Q6PID8 442 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
CHD9-220ENST00000569794 EIF5BO60841 1220 aaKnown RBP7.1□□□□□ -1.27
CHD9-220ENST00000569794 MAN2A2P49641 1150 aa7.1□□□□□ -1.27
CHD9-220ENST00000569794 ACAP1Q15027 740 aa7.1□□□□□ -1.27
CHD9-220ENST00000569794 ZNF662Q6ZS27 426 aa7.1□□□□□ -1.27
CHD9-220ENST00000569794 SLC7A6OSQ96CW6 309 aaPredicted RBP7.1□□□□□ -1.27
CHD9-220ENST00000569794 COQ6Q9Y2Z9 468 aa7.1□□□□□ -1.27
CHD9-220ENST00000569794 RPS6KA4O75676 772 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 BMP5P22003 454 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 SESN2P58004 480 aaPredicted RBP7.09□□□□□ -1.27
CHD9-220ENST00000569794 CATSPEREQ5SY80 951 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 GPHA2Q96T91 129 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 DHRS4Q9BTZ2 278 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 CELF4Q9BZC1 486 aaKnown RBP7.09□□□□□ -1.27
CHD9-220ENST00000569794 NRDE2Q9H7Z3 1164 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 USP35Q9P2H5 1018 aa7.09□□□□□ -1.27
CHD9-220ENST00000569794 TRAF5O00463 557 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
CHD9-220ENST00000569794 H2AFYO75367 372 aaKnown RBP7.08□□□□□ -1.28
CHD9-220ENST00000569794 FAM153BP0C7A2 387 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 ADAM8P78325 824 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 FSTL1Q12841 308 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 TMEM132BQ14DG7 1078 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 GAREM2Q75VX8 874 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 MRGPREQ86SM8 312 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 GSPT2Q8IYD1 628 aaKnown RBP7.08□□□□□ -1.28
CHD9-220ENST00000569794 VOPP1Q96AW1 172 aa7.08□□□□□ -1.28
CHD9-220ENST00000569794 RPL10LQ96L21 214 aaKnown RBP7.08□□□□□ -1.28
CHD9-220ENST00000569794 SAE1Q9UBE0 346 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms