RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 PAWRQ96IZ0 340 aaKnown RBP26.08■■□□□ 1.77
RAB40C-212ENST00000569575 C17orf75Q9HAS0 396 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 ATP6V0A4Q9HBG4 840 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 PDLIM7Q9NR12 457 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 SETD4Q9NVD3 440 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 TUBE1Q9UJT0 475 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 ODF2LQ9ULJ1 636 aa26.08■■□□□ 1.77
RAB40C-212ENST00000569575 SMIM35A0A1B0GVV1 85 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 ZBTB39O15060 712 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 TLR3O15455 904 aaKnown RBP26.07■■□□□ 1.76
RAB40C-212ENST00000569575 KLRC1P26715 233 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 NPEPPSP55786 919 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 SKOR2Q2VWA4 1001 aaPredicted RBP26.07■■□□□ 1.76
RAB40C-212ENST00000569575 LONRF3Q496Y0 759 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 C1orf186Q6ZWK4 172 aa26.07■■□□□ 1.76
RAB40C-212ENST00000569575 ASAP2O43150 1006 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 CAND2O75155 1236 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 C22orf31O95567 290 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 EN2P19622 333 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-212ENST00000569575 RTP1P59025 263 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 CHMP4BP1P59074 171 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 MCM6Q14566 821 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 MARCH8Q5T0T0 291 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 IER5Q5VY09 327 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 PLA2G4FQ68DD2 849 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 TRMT1LQ7Z2T5 733 aaKnown RBP26.06■■□□□ 1.76
RAB40C-212ENST00000569575 RSPH3Q86UC2 560 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 KIFAP3Q92845 792 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 MTRQ99707 1265 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 SERTAD1Q9UHV2 236 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 ARID2Q68CP9 1835 aa26.06■■□□□ 1.76
RAB40C-212ENST00000569575 DCDC2CA8MYV0 355 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 NR1I2O75469 434 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 SSBP05455 408 aaKnown RBP eCLIP26.05■■□□□ 1.76
RAB40C-212ENST00000569575 SCP2P22307 547 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 PTK7Q13308 1070 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 PTGISQ16647 500 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 FAM43BQ6ZT52 329 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-212ENST00000569575 SH3RF1Q7Z6J0 888 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 SERINC5Q86VE9 423 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 DRC1Q96MC2 740 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 C7orf25Q9BPX7 421 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 DACT1Q9NYF0 836 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 NOD1Q9Y239 953 aa26.05■■□□□ 1.76
RAB40C-212ENST00000569575 LIG1P18858 919 aa26.04■■□□□ 1.76
RAB40C-212ENST00000569575 MXD4Q14582 209 aaPredicted RBP26.04■■□□□ 1.76
RAB40C-212ENST00000569575 EMC2Q15006 297 aa26.04■■□□□ 1.76
RAB40C-212ENST00000569575 GPBP1Q86WP2 473 aa26.04■■□□□ 1.76
RAB40C-212ENST00000569575 MAP7D2Q96T17 732 aa26.04■■□□□ 1.76
RAB40C-212ENST00000569575 IGBP1P78318 339 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 GDF6Q6KF10 455 aaPredicted RBP26.03■■□□□ 1.76
RAB40C-212ENST00000569575 EFCAB12Q6NXP0 572 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 FAM126BQ8IXS8 530 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 CCDC155Q8N6L0 562 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 LINC01465Q8N7H1 131 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 SLC17A8Q8NDX2 589 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 DIS3LQ8TF46 1054 aaKnown RBP26.03■■□□□ 1.76
RAB40C-212ENST00000569575 LRRC15Q8TF66 581 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 PAGE5Q96GU1 130 aa26.03■■□□□ 1.76
RAB40C-212ENST00000569575 GTPBP4Q9BZE4 634 aaKnown RBP26.03■■□□□ 1.76
RAB40C-212ENST00000569575 PVALEFA0A1B0GWK0 134 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 TMEM150BA6NC51 233 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 GTPBP6O43824 516 aaPredicted RBP26.02■■□□□ 1.76
RAB40C-212ENST00000569575 USO1O60763 962 aaKnown RBP26.02■■□□□ 1.76
RAB40C-212ENST00000569575 CD4P01730 458 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 KRT18P05783 430 aaKnown RBP26.02■■□□□ 1.76
RAB40C-212ENST00000569575 CYP2C9P11712 490 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 ABCD1P33897 745 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 POU5F1BQ06416 359 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 PPP2R5AQ15172 486 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 TRIM9Q9C026 710 aa26.02■■□□□ 1.76
RAB40C-212ENST00000569575 A0A087WWV3 80 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 CCDC85CA6NKD9 419 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 TREHO43280 583 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 CENPFP49454 3210 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 RBL2Q08999 1139 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 TPRNQ4KMQ1 711 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 ARSHQ5FYA8 562 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 METTL13Q8N6R0 699 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 CAGE1Q8TC20 777 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 PSPC1Q8WXF1 523 aaKnown RBP26.01■■□□□ 1.75
RAB40C-212ENST00000569575 DDX12PQ92771 950 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 CCDC47Q96A33 483 aaKnown RBP26.01■■□□□ 1.75
RAB40C-212ENST00000569575 HTATIP2Q9BUP3 242 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 LARSQ9P2J5 1176 aaKnown RBP26.01■■□□□ 1.75
RAB40C-212ENST00000569575 SEL1LQ9UBV2 794 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 COL4A3BPQ9Y5P4 624 aa26.01■■□□□ 1.75
RAB40C-212ENST00000569575 PHLPP2Q6ZVD8 1323 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 GAP43P17677 238 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 ARL2P36404 184 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 DHX8Q14562 1220 aaKnown RBP26■■□□□ 1.75
RAB40C-212ENST00000569575 TRAPPC12Q8WVT3 735 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 SYAP1Q96A49 352 aaPredicted RBP26■■□□□ 1.75
RAB40C-212ENST00000569575 RUSC1Q9BVN2 902 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 SUGCTQ9HAC7 445 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 XPNPEP1Q9NQW7 623 aa26■■□□□ 1.75
RAB40C-212ENST00000569575 TRIP12Q14669 1992 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-212ENST00000569575 MYMKA6NI61 221 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 B4GALT4O60513 344 aa25.99■■□□□ 1.75
RAB40C-212ENST00000569575 TBCAO75347 108 aaKnown RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms