RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 Q8N1X5 172 aa4.53□□□□□ -1.68
BBS4-215ENST00000569001 BORCS6Q96GS4 357 aa4.53□□□□□ -1.68
BBS4-215ENST00000569001 RNPC3Q96LT9 517 aaKnown RBP4.53□□□□□ -1.68
BBS4-215ENST00000569001 DRC1Q96MC2 740 aa4.53□□□□□ -1.68
BBS4-215ENST00000569001 ASB1Q9Y576 335 aa4.53□□□□□ -1.68
BBS4-215ENST00000569001 KPNA6O60684 536 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 ASLP04424 464 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 MEOX1P50221 254 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 FNDC3BQ53EP0 1204 aaKnown RBP4.52□□□□□ -1.69
BBS4-215ENST00000569001 CDCA2Q69YH5 1023 aaPredicted RBP4.52□□□□□ -1.69
BBS4-215ENST00000569001 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
BBS4-215ENST00000569001 Q6ZSN1 163 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 USP30Q70CQ3 517 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 KIAA1958Q8N8K9 716 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 SCYL1Q96KG9 808 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 AGO3Q9H9G7 860 aaKnown RBP4.52□□□□□ -1.69
BBS4-215ENST00000569001 TMEM260Q9NX78 707 aa4.52□□□□□ -1.69
BBS4-215ENST00000569001 FAM83GA6ND36 823 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 ZNF891A8MT65 544 aaPredicted RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 CBX4O00257 560 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 AKAP8O43823 692 aaKnown RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 RAD17O75943 681 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 PRLP01236 227 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 C6P13671 934 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 ACO1P21399 889 aaKnown RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 COMTP21964 271 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 APEX1P27695 318 aaKnown RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 MSX2P35548 267 aaPredicted RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 DGCR2P98153 550 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 HGFACQ04756 655 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 FOXL1Q12952 345 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 SAFB2Q14151 953 aaKnown RBP eCLIP4.51□□□□□ -1.69
BBS4-215ENST00000569001 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 PRAMEF9Q5VWM5 478 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 CREB3L3Q68CJ9 461 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 ESRP1Q6NXG1 681 aaKnown RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 NXPE1Q8N323 547 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 ZNF808Q8N4W9 903 aaPredicted RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 SLC16A11Q8NCK7 471 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 UBXN4Q92575 508 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 ELF4Q99607 663 aaPredicted RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 OR10A2Q9H208 303 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 PCIF1Q9H4Z3 704 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 CABP5Q9NP86 173 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 HECAQ9UBI9 543 aaPredicted RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 PUF60Q9UHX1 559 aaKnown RBP4.51□□□□□ -1.69
BBS4-215ENST00000569001 FBXO10Q9UK96 956 aa4.51□□□□□ -1.69
BBS4-215ENST00000569001 LCHNA4D1U4 455 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 B4E1Z4 1266 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 PLSCR1O15162 318 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 NPTXRO95502 500 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 ATP2C1P98194 919 aaPredicted RBP4.5□□□□□ -1.69
BBS4-215ENST00000569001 NFYCQ13952 458 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 MYBPC3Q14896 1274 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 IGFL4Q6B9Z1 124 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 SLFN12LQ6IEE8 588 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 CNNM4Q6P4Q7 775 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 DHX37Q8IY37 1157 aaKnown RBP4.5□□□□□ -1.69
BBS4-215ENST00000569001 OR5AN1Q8NGI8 311 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 CALML6Q8TD86 181 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 RTF1Q92541 710 aaKnown RBP4.5□□□□□ -1.69
BBS4-215ENST00000569001 EXTL1Q92935 676 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 TUBGCP5Q96RT8 1024 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 FOXB1Q99853 325 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 VPS11Q9H270 941 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 MS4A5Q9H3V2 200 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
BBS4-215ENST00000569001 MRPL42Q9Y6G3 142 aaKnown RBP4.5□□□□□ -1.69
BBS4-215ENST00000569001 UBA6A0AVT1 1052 aaPredicted RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 H7C1D1 291 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 APOL3O95236 402 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 ATP2A2P16615 1042 aaKnown RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 TACR2P21452 398 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 RANGAP1P46060 587 aaPredicted RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 NEK4P51957 841 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 PRKD1Q15139 912 aaPredicted RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 NRN1LQ496H8 165 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 USP39Q53GS9 565 aaKnown RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 UNQ6494/PRO21346Q6UXR6 183 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 ZFPM1Q8IX07 1006 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 RPL10LQ96L21 214 aaKnown RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 C16orf92Q96LL3 132 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 CDK5RAP1Q96SZ6 601 aaKnown RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 SEMA4AQ9H3S1 761 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 POFUT1Q9H488 388 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 TOMM22Q9NS69 142 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 OXSMQ9NWU1 459 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 B4GALT6Q9UBX8 382 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 DNAI1Q9UI46 699 aa4.49□□□□□ -1.69
BBS4-215ENST00000569001 RBM8AQ9Y5S9 174 aaKnown RBP4.49□□□□□ -1.69
BBS4-215ENST00000569001 C2orf78A6NCI8 922 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 HNRNPLP14866 589 aaKnown RBP eCLIP4.48□□□□□ -1.69
BBS4-215ENST00000569001 FNTBP49356 437 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 ROM1Q03395 351 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 RIN1Q13671 783 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 PCBP1Q15365 356 aaKnown RBP eCLIP4.48□□□□□ -1.69
BBS4-215ENST00000569001 ZNF174Q15697 407 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 ARHGAP44Q17R89 818 aa4.48□□□□□ -1.69
BBS4-215ENST00000569001 HS1BP3Q53T59 392 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms