RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 GBF1Q92538 1859 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 C22orf31O95567 290 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 BRD1O95696 1058 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 P4HBP07237 508 aaKnown RBP15.4■□□□□ 0.06
NEIL1-220ENST00000568881 OR52Z1P0C646 297 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 TXKP42681 527 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 QARSP47897 775 aaKnown RBP15.4■□□□□ 0.06
NEIL1-220ENST00000568881 PTGDRQ13258 359 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 B3GNT9Q6UX72 402 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
NEIL1-220ENST00000568881 GJA10Q969M2 543 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 ZNF396Q96N95 335 aaPredicted RBP15.4■□□□□ 0.06
NEIL1-220ENST00000568881 YME1L1Q96TA2 773 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 GINS2Q9Y248 185 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
NEIL1-220ENST00000568881 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 GPR182O15218 404 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
NEIL1-220ENST00000568881 ZNF862O60290 1169 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 RPS6KA5O75582 802 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 CRYBB1P53674 252 aaPredicted RBP15.39■□□□□ 0.05
NEIL1-220ENST00000568881 TMEM62Q0P6H9 643 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 EPHA7Q15375 998 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 NCAPH2Q6IBW4 605 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 EFCAB12Q6NXP0 572 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 FAM117BQ6P1L5 589 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 FAM173BQ6P4H8 233 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 TOP1MTQ969P6 601 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 SCLT1Q96NL6 688 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
NEIL1-220ENST00000568881 NIFKQ9BYG3 293 aaKnown RBP15.39■□□□□ 0.05
NEIL1-220ENST00000568881 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 TTC12Q9H892 705 aaPredicted RBP15.39■□□□□ 0.05
NEIL1-220ENST00000568881 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
NEIL1-220ENST00000568881 MICAL3Q7RTP6 2002 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 ZBTB42B2RXF5 422 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 STAG3L1P0CL83 205 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 IGFBP4P22692 258 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 CD52P31358 61 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 DDIT3P35638 169 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 SF3A1Q15459 793 aaKnown RBP15.38■□□□□ 0.05
NEIL1-220ENST00000568881 UGCGQ16739 394 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 MTERF2Q49AM1 385 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.38■□□□□ 0.05
NEIL1-220ENST00000568881 C4orf32Q8N8J7 132 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 BANK1Q8NDB2 785 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 CCDC43Q96MW1 224 aaKnown RBP15.38■□□□□ 0.05
NEIL1-220ENST00000568881 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
NEIL1-220ENST00000568881 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 SUGCTQ9HAC7 445 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 VAV3Q9UKW4 847 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
NEIL1-220ENST00000568881 PADI3Q9ULW8 664 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 PRUNE2Q8WUY3 3088 aa15.38■□□□□ 0.05
NEIL1-220ENST00000568881 WDR81Q562E7 1941 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 UPP2O95045 317 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 PRPHP41219 470 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 ATP2C1P98194 919 aaPredicted RBP15.37■□□□□ 0.05
NEIL1-220ENST00000568881 TAP1Q03518 808 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 NFX1Q12986 1120 aaKnown RBP15.37■□□□□ 0.05
NEIL1-220ENST00000568881 KIZQ2M2Z5 673 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 ARL6IP4Q66PJ3 421 aaKnown RBP15.37■□□□□ 0.05
NEIL1-220ENST00000568881 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 ARNTL2Q8WYA1 636 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 RAB34Q9BZG1 259 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
NEIL1-220ENST00000568881 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
NEIL1-220ENST00000568881 SPTBN5Q9NRC6 3674 aaKnown RBP15.37■□□□□ 0.05
NEIL1-220ENST00000568881 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 DENND3A2RUS2 1198 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 GAS2O43903 313 aaKnown RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 VTNP04004 478 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 TECP42680 631 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 CLCN3P51790 818 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 HTRA4P83105 476 aaPredicted RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 C4orf19Q8IY42 314 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 ERMNQ8TAM6 284 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 USP28Q96RU2 1077 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 LXNQ9BS40 222 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 INO80BQ9C086 356 aaPredicted RBP15.36■□□□□ 0.05
NEIL1-220ENST00000568881 C1orf112Q9NSG2 853 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 CFAP45Q9UL16 551 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 LRFN2Q9ULH4 789 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 RWDD3Q9Y3V2 267 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 UNC80Q8N2C7 3258 aa15.36■□□□□ 0.05
NEIL1-220ENST00000568881 LCHNA4D1U4 455 aa15.35■□□□□ 0.05
NEIL1-220ENST00000568881 EPOPA6NHQ4 379 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms