RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 TSKSQ9UJT2 592 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 BUB1BO60566 1050 aaPredicted RBP18.65■□□□□ 0.58
VAC14-210ENST00000568548 NR3C1P04150 777 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 ZNF76P36508 570 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 USP8P40818 1118 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 USP11P51784 963 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 ARHGAP4P98171 946 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 CCDC114Q96M63 670 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 TMX4Q9H1E5 349 aaPredicted RBP18.65■□□□□ 0.58
VAC14-210ENST00000568548 GGT7Q9UJ14 662 aa18.65■□□□□ 0.58
VAC14-210ENST00000568548 TISP43B9A030 160 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 SHBGP04278 402 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 SPATA31C1P0DKV0 1188 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 CLK2P49760 499 aaKnown RBP18.64■□□□□ 0.58
VAC14-210ENST00000568548 SEPT2Q15019 361 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 MASTLQ96GX5 879 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 CEP63Q96MT8 703 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 CCDC113Q9H0I3 377 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 NT5C3AQ9H0P0 336 aa18.64■□□□□ 0.58
VAC14-210ENST00000568548 G3V3G9 751 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 PGRMC1O00264 195 aaKnown RBP18.64■□□□□ 0.57
VAC14-210ENST00000568548 H2AFZP0C0S5 128 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 DCAF8Q5TAQ9 597 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 H2AFVQ71UI9 128 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 MYCT1Q8N699 235 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 LRRC57Q8N9N7 239 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 IQCDQ96DY2 449 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 SCLT1Q96NL6 688 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 LRRC27Q9C0I9 530 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 ERVK-5Q9HDB9 667 aa18.64■□□□□ 0.57
VAC14-210ENST00000568548 FOXO6A8MYZ6 492 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 EVI5O60447 810 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 ARHGEF26Q96DR7 871 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 ISCUQ9H1K1 167 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 SNX24Q9Y343 169 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 ECM2O94769 699 aaPredicted RBP18.63■□□□□ 0.57
VAC14-210ENST00000568548 PLTPP55058 493 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 GABPAQ06546 454 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 SLC35G2Q8TBE7 412 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 CYFIP2Q96F07 1278 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 DDX39AO00148 427 aaKnown RBP18.63■□□□□ 0.57
VAC14-210ENST00000568548 MEIS2O14770 477 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 NT5C2P49902 561 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 E2F5Q15329 346 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 SLFN13Q68D06 897 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 DPY19L2P1Q6NXN4 242 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 CDC42EP5Q6NZY7 148 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 LNX1Q8TBB1 728 aaPredicted RBP18.63■□□□□ 0.57
VAC14-210ENST00000568548 WHAMMQ8TF30 809 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 SLC35C1Q96A29 364 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.63■□□□□ 0.571e-6■■□□□ 14.4
VAC14-210ENST00000568548 PCIF1Q9H4Z3 704 aa18.63■□□□□ 0.57
VAC14-210ENST00000568548 ATMINO43313 823 aaPredicted RBP18.62■□□□□ 0.57
VAC14-210ENST00000568548 CPP00450 1065 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 KRT13P13646 458 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 SETQ01105 290 aaPredicted RBP18.62■□□□□ 0.57
VAC14-210ENST00000568548 CCDC38Q502W7 563 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 CCDC121Q6ZUS5 278 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 CABS1Q96KC9 395 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 SELENOSQ9BQE4 189 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 NUCKS1Q9H1E3 243 aaKnown RBP18.62■□□□□ 0.57
VAC14-210ENST00000568548 DNAJC18Q9H819 358 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.62■□□□□ 0.57
VAC14-210ENST00000568548 PNMA2Q9UL42 364 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 SPDYE3A6NKU9 549 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 HSPA9P38646 679 aaKnown RBP18.62■□□□□ 0.57
VAC14-210ENST00000568548 MARCKSL1P49006 195 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 EDEM3Q9BZQ6 932 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 ABCB11O95342 1321 aa18.62■□□□□ 0.57
VAC14-210ENST00000568548 DDTLA6NHG4 134 aaPredicted RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 H0YGN5 161 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 FLOT1O75955 427 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 EPHA7Q15375 998 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 CBWD6Q4V339 395 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 CBWD3Q5JTY5 395 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 CBWD5Q5RIA9 395 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 CPLX4Q7Z7G2 160 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 PHLDB2Q86SQ0 1253 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 CCDC13Q8IYE1 715 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 SYN2Q92777 582 aaPredicted RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 SIX2Q9NPC8 291 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 DDX20Q9UHI6 824 aaKnown RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 PTPN22Q9Y2R2 807 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 NFS1Q9Y697 457 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 ASTN1O14525 1302 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 DDX60LQ5H9U9 1706 aaKnown RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 CAND2O75155 1236 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 GNA14O95837 355 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 IFNAR2P48551 515 aa18.61■□□□□ 0.57
VAC14-210ENST00000568548 DRAP1Q14919 205 aaPredicted RBP18.61■□□□□ 0.57
VAC14-210ENST00000568548 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms