RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FBXO47Q5MNV8 452 aa14.55□□□□□ -0.08
CNOT1-213ENST00000568158 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
CNOT1-213ENST00000568158 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
CNOT1-213ENST00000568158 AKT3Q9Y243 479 aa14.55□□□□□ -0.08
CNOT1-213ENST00000568158 CLIC4Q9Y696 253 aa14.55□□□□□ -0.08
CNOT1-213ENST00000568158 IGKV6-21A0A0C4DH24 114 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 PP2D1A8MPX8 630 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 M0QZ92 97 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 LAD1O00515 517 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 GPR32O75388 356 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 LYPLA2O95372 231 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 RPLP2P05387 115 aaKnown RBP14.54□□□□□ -0.08
CNOT1-213ENST00000568158 TMOD1P28289 359 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 CD52P31358 61 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 PRPHP41219 470 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 RABGGTBP53611 331 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 NLRP11P59045 1033 aaKnown RBP14.54□□□□□ -0.08
CNOT1-213ENST00000568158 KIZQ2M2Z5 673 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
CNOT1-213ENST00000568158 IGSF22Q8N9C0 903 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 NEK9Q8TD19 979 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 SEPT8Q92599 483 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 MTIF3Q9H2K0 278 aaKnown RBP14.54□□□□□ -0.08
CNOT1-213ENST00000568158 TUFT1Q9NNX1 390 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
CNOT1-213ENST00000568158 ANKEF1Q9NU02 776 aa14.54□□□□□ -0.08
CNOT1-213ENST00000568158 SIP14410 1827 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 ABHD14A-ACY1A0A1B0GW23 586 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 VWA3AA6NCI4 1184 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 RPA1P27694 616 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 CCT6AP40227 531 aaKnown RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 PBX2P40425 430 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 DEFB103AP81534 67 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 SMAD3P84022 425 aaKnown RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 CEBPZQ03701 1054 aaKnown RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 TMCO2Q7Z6W1 182 aaPredicted RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 ERMNQ8TAM6 284 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 TMEM40Q8WWA1 233 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 OSMRQ99650 979 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 IFIH1Q9BYX4 1025 aaKnown RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 ADAMTS10Q9H324 1103 aa14.53□□□□□ -0.08
CNOT1-213ENST00000568158 SUCLA2Q9P2R7 463 aaPredicted RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 NOC2LQ9Y3T9 749 aaKnown RBP14.53□□□□□ -0.08
CNOT1-213ENST00000568158 BAIAP3O94812 1187 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 MYOGP15173 224 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 ATP2A2P16615 1042 aaKnown RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 KCNJ6P48051 423 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 RARRES1P49788 294 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 DNM2P50570 870 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 CRYBB1P53674 252 aaPredicted RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 WDR5P61964 334 aaKnown RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 PKP1Q13835 747 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 TSHZ1Q6ZSZ6 1077 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 RTN4RL1Q86UN2 441 aaPredicted RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 KSR1Q8IVT5 923 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 NACC1Q96RE7 527 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 MAP7D2Q96T17 732 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 MMTAG2Q9BU76 263 aaKnown RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 ZSCAN16Q9H4T2 348 aaPredicted RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 DHX33Q9H6R0 707 aaKnown RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 TFIP11Q9UBB9 837 aaKnown RBP14.52□□□□□ -0.09
CNOT1-213ENST00000568158 PADI3Q9ULW8 664 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 SQORQ9Y6N5 450 aa14.52□□□□□ -0.09
CNOT1-213ENST00000568158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 ENPP3O14638 875 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 CSDE1O75534 798 aaKnown RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 MARCKSP29966 332 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 RFC5P40937 340 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 GPC3P51654 580 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 POLGP54098 1239 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 GRIN1Q05586 938 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 NFX1Q12986 1120 aaKnown RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 PTPAQ15257 358 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 ARL6IP4Q66PJ3 421 aaKnown RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 FAM117BQ6P1L5 589 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 Q7L0L9 218 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 RHPN2Q8IUC4 686 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 PRPF31Q8WWY3 499 aaKnown RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 JPH2Q9BR39 696 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-213ENST00000568158 PBX4Q9BYU1 374 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 RAB34Q9BZG1 259 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 XPNPEP1Q9NQW7 623 aa14.51□□□□□ -0.09
CNOT1-213ENST00000568158 A0A087WZ62 844 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 RPS6KA5O75582 802 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 ZSCAN22P10073 491 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-213ENST00000568158 FGFR4P22455 802 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 EMC2Q15006 297 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 ZRSR1Q15695 479 aaKnown RBP14.5□□□□□ -0.09
CNOT1-213ENST00000568158 KRT79Q5XKE5 535 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 MAEAQ7L5Y9 396 aa14.5□□□□□ -0.09
CNOT1-213ENST00000568158 HERC6Q8IVU3 1022 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms