RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 FBXO18Q8NFZ0 1043 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 PPP1R16BQ96T49 567 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 YME1L1Q96TA2 773 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 RC3H2Q9HBD1 1191 aaKnown RBP28.3■■■□□ 2.12
FANCA-228ENST00000567943 NRBP2Q9NSY0 501 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 GINS2Q9Y248 185 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 NOC2LQ9Y3T9 749 aaKnown RBP28.3■■■□□ 2.12
FANCA-228ENST00000567943 TBX3O15119 743 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 MAGEB2O15479 319 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 PAK2Q13177 524 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 KIZQ2M2Z5 673 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 EFCAB12Q6NXP0 572 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 LRRC71Q8N4P6 559 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 BANK1Q8NDB2 785 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 GDPD5Q8WTR4 605 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 NIFKQ9BYG3 293 aaKnown RBP28.29■■■□□ 2.12
FANCA-228ENST00000567943 TSPYL2Q9H2G4 693 aaPredicted RBP28.29■■■□□ 2.12
FANCA-228ENST00000567943 ERVK-5Q9HDB9 667 aa28.29■■■□□ 2.12
FANCA-228ENST00000567943 SPIRE1Q08AE8 756 aa28.28■■■□□ 2.12
FANCA-228ENST00000567943 RALGAPA2Q2PPJ7 1873 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 MGEA5O60502 916 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 LINC00271P0C7V0 271 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 MICALL1Q8N3F8 863 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 OSMRQ99650 979 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 SH2D3AQ9BRG2 576 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 FTHL17Q9BXU8 183 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 ADAMTS10Q9H324 1103 aa28.27■■■□□ 2.12
FANCA-228ENST00000567943 FOXP1Q9H334 677 aaPredicted RBP28.27■■■□□ 2.12
FANCA-228ENST00000567943 WRAP73Q9P2S5 460 aaPredicted RBP28.27■■■□□ 2.12
FANCA-228ENST00000567943 MUC3AQ02505 3323 aa28.26■■■□□ 2.12
FANCA-228ENST00000567943 BAG4O95429 457 aaKnown RBP28.26■■■□□ 2.11
FANCA-228ENST00000567943 ATP2B1P20020 1258 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 CRYBB1P53674 252 aaPredicted RBP28.26■■■□□ 2.11
FANCA-228ENST00000567943 DRP2Q13474 957 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 XKR3Q5GH77 459 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 ANO5Q75V66 913 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 SLFN12Q8IYM2 578 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 ZNF689Q96CS4 500 aaPredicted RBP28.26■■■□□ 2.11
FANCA-228ENST00000567943 SEPT9Q9UHD8 586 aaPredicted RBP28.26■■■□□ 2.11
FANCA-228ENST00000567943 ST3GAL5Q9UNP4 418 aa28.26■■■□□ 2.11
FANCA-228ENST00000567943 RPS6KA5O75582 802 aa28.25■■■□□ 2.11
FANCA-228ENST00000567943 NFX1Q12986 1120 aaKnown RBP28.25■■■□□ 2.11
FANCA-228ENST00000567943 GNL2Q13823 731 aaKnown RBP28.25■■■□□ 2.11
FANCA-228ENST00000567943 FAM228AQ86W67 206 aa28.25■■■□□ 2.11
FANCA-228ENST00000567943 KIF3AQ9Y496 699 aa28.25■■■□□ 2.11
FANCA-228ENST00000567943 DLL1O00548 723 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 GTPBP6O43824 516 aaPredicted RBP28.24■■■□□ 2.11
FANCA-228ENST00000567943 NEMFO60524 1076 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 DGKIO75912 1065 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 NLRP11P59045 1033 aaKnown RBP28.24■■■□□ 2.11
FANCA-228ENST00000567943 PSMC5P62195 406 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 CALCRLQ16602 461 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 MTERF2Q49AM1 385 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 EPC2Q52LR7 807 aa28.24■■■□□ 2.11
FANCA-228ENST00000567943 KIAA1671Q9BY89 1806 aa28.23■■■□□ 2.11
FANCA-228ENST00000567943 IGKV6-21A0A0C4DH24 114 aa28.23■■■□□ 2.11
FANCA-228ENST00000567943 TBC1D8BQ0IIM8 1120 aa28.23■■■□□ 2.11
FANCA-228ENST00000567943 ZNF668Q96K58 619 aaPredicted RBP28.23■■■□□ 2.11
FANCA-228ENST00000567943 COL25A1Q9BXS0 654 aaPredicted RBP28.23■■■□□ 2.11
FANCA-228ENST00000567943 AKT3Q9Y243 479 aa28.23■■■□□ 2.11
FANCA-228ENST00000567943 DDX11L8A8MPP1 907 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 QARSP47897 775 aaKnown RBP28.22■■■□□ 2.11
FANCA-228ENST00000567943 PLA2G4FQ68DD2 849 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 NCAPH2Q6IBW4 605 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 NOSTRINQ8IVI9 506 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 TMEM192Q8IY95 271 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 ZNF579Q8NAF0 562 aaKnown RBP28.22■■■□□ 2.11
FANCA-228ENST00000567943 FBXO22Q8NEZ5 403 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 MAP7D2Q96T17 732 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 RGL1Q9NZL6 768 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 ARID2Q68CP9 1835 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 ATG2AQ2TAZ0 1938 aa28.22■■■□□ 2.11
FANCA-228ENST00000567943 BRWD1Q9NSI6 2320 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 ADGRA3Q8IWK6 1321 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 TMOD1P28289 359 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 GJB2P29033 226 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 MCM7P33993 719 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 GPC3P51654 580 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 EPHA7Q15375 998 aa28.21■■■□□ 2.11
FANCA-228ENST00000567943 FNDC1Q4ZHG4 1894 aaPredicted RBP28.21■■■□□ 2.11
FANCA-228ENST00000567943 GPR182O15218 404 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 MAFO75444 373 aaPredicted RBP28.2■■■□□ 2.1
FANCA-228ENST00000567943 P4HBP07237 508 aaKnown RBP28.2■■■□□ 2.1
FANCA-228ENST00000567943 DSC3Q14574 896 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 NPAS4Q8IUM7 802 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 FIBCD1Q8N539 461 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 SAMD11Q96NU1 681 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 MTMR9Q96QG7 549 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 ADAM2Q99965 735 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 RGS18Q9NS28 235 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 LMCD1Q9NZU5 365 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 PCDHA12Q9UN75 941 aa28.2■■■□□ 2.1
FANCA-228ENST00000567943 TTC28Q96AY4 2481 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 MYO7AQ13402 2215 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 TXKP42681 527 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 GATMP50440 423 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 NPEPPSP55786 919 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 CLP1Q92989 425 aaKnown RBP28.19■■■□□ 2.1
FANCA-228ENST00000567943 DYDC2Q96IM9 177 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 LXNQ9BS40 222 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms