RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 DHX33Q9H6R0 707 aaKnown RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 FBXO2Q9UK22 296 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 GHRP10912 638 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 MARCKSP29966 332 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 EMC2Q15006 297 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 FOXD4L6Q3SYB3 417 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 XKR9Q5GH70 373 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 RASIP1Q5U651 963 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 FOXD4L3Q6VB84 417 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 RPUSD2Q8IZ73 545 aaKnown RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 RNPC3Q96LT9 517 aaKnown RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 ANKEF1Q9NU02 776 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 CXXC1Q9P0U4 656 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 AKT3Q9Y243 479 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 PPME1Q9Y570 386 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 MORC2Q9Y6X9 1032 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-220ENST00000567720 KDM3AQ9Y4C1 1321 aa19.22■□□□□ 0.67
COMMD4-220ENST00000567720 MUTP22033 750 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 DDIT3P35638 169 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 RFC5P40937 340 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 POLGP54098 1239 aaPredicted RBP19.21■□□□□ 0.67
COMMD4-220ENST00000567720 LPIN1Q14693 890 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 FBXO47Q5MNV8 452 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 KRT79Q5XKE5 535 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 OTUD6AQ7L8S5 288 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 OTOP2Q7RTS6 562 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 NME8Q8N427 588 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 HERVK_113Q902F9 699 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 MAP7D2Q96T17 732 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 SUGCTQ9HAC7 445 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 XPNPEP1Q9NQW7 623 aa19.21■□□□□ 0.67
COMMD4-220ENST00000567720 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
COMMD4-220ENST00000567720 M0QZ92 97 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 GPR32O75388 356 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 KIZQ2M2Z5 673 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 PLEKHG4Q58EX7 1191 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 HABP4Q5JVS0 413 aaKnown RBP19.2■□□□□ 0.66
COMMD4-220ENST00000567720 IER5Q5VY09 327 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CNKSR3Q6P9H4 555 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 KCNK18Q7Z418 384 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 TMEM40Q8WWA1 233 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 SLC7A3Q8WY07 619 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 AK8Q96MA6 479 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
COMMD4-220ENST00000567720 ZNF396Q96N95 335 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-220ENST00000567720 PNMA5Q96PV4 448 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CELF4Q9BZC1 486 aaKnown RBP19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CDHR5Q9HBB8 845 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
COMMD4-220ENST00000567720 KIAA1024Q9UPX6 916 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 STK24Q9Y6E0 443 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CHD9Q3L8U1 2897 aa19.2■□□□□ 0.66
COMMD4-220ENST00000567720 CDH23Q9H251 3354 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 USO1O60763 962 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 FGBP02675 491 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 TMOD1P28289 359 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 LONP1P36776 959 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 GPC3P51654 580 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 GRB10Q13322 594 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 HYIQ5T013 277 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 LINC00301Q8NCQ3 95 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 DBF4BQ8NFT6 615 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 CHAMP1Q96JM3 812 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 ZNF668Q96K58 619 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 NACC1Q96RE7 527 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 OSMRQ99650 979 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 JPH2Q9BR39 696 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 IFIH1Q9BYX4 1025 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 CSRNP2Q9H175 543 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 AGO3Q9H9G7 860 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 GINS2Q9Y248 185 aa19.19■□□□□ 0.66
COMMD4-220ENST00000567720 SRPRBQ9Y5M8 271 aaKnown RBP19.19■□□□□ 0.66
COMMD4-220ENST00000567720 YEATS4O95619 227 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
COMMD4-220ENST00000567720 NLRP11P59045 1033 aaKnown RBP19.18■□□□□ 0.66
COMMD4-220ENST00000567720 DNM1Q05193 864 aaKnown RBP19.18■□□□□ 0.66
COMMD4-220ENST00000567720 STK38Q15208 465 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 TMEM119Q4V9L6 283 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 FAM109BQ6ICB4 259 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-220ENST00000567720 CABP7Q86V35 215 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 TMEM143Q96AN5 459 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 CLIC6Q96NY7 704 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 MTRQ99707 1265 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 ADAMTS10Q9H324 1103 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 ATP6V0A4Q9HBG4 840 aa19.18■□□□□ 0.66
COMMD4-220ENST00000567720 COL4A6Q14031 1691 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 TTC3P53804 2025 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 E9PMD0 336 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 SOX1O00570 391 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-220ENST00000567720 GAS2O43903 313 aaKnown RBP19.17■□□□□ 0.66
COMMD4-220ENST00000567720 DGAT1O75907 488 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 BAIAP3O94812 1187 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 ACTN1P12814 892 aa19.17■□□□□ 0.66
COMMD4-220ENST00000567720 CD52P31358 61 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms