RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 LPIN1Q14693 890 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 FBXO47Q5MNV8 452 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 HYIQ5T013 277 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 EFCAB12Q6NXP0 572 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 DEFB128Q7Z7B8 93 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 RSPH3Q86UC2 560 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 LRRC71Q8N4P6 559 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 XPNPEP1Q9NQW7 623 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 MTMR10Q9NXD2 777 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 FBXO2Q9UK22 296 aaPredicted RBP13.88□□□□□ -0.19
RNF40-211ENST00000567365 A0A087WWV3 80 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 FGBP02675 491 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 CDC25AP30304 524 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 TBC1D8BQ0IIM8 1120 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 BECN1Q14457 450 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 IER5Q5VY09 327 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 CNKSR3Q6P9H4 555 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 OTUD6AQ7L8S5 288 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 DBF4BQ8NFT6 615 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 PIGOQ8TEQ8 1089 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 AK8Q96MA6 479 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
RNF40-211ENST00000567365 ADAMTS10Q9H324 1103 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 AGO3Q9H9G7 860 aaKnown RBP13.87□□□□□ -0.19
RNF40-211ENST00000567365 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 DBR1Q9UK59 544 aaKnown RBP13.87□□□□□ -0.19
RNF40-211ENST00000567365 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
RNF40-211ENST00000567365 VWA3AA6NCI4 1184 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 VTNP04004 478 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 RFC5P40937 340 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 XKR9Q5GH70 373 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 HAUS3Q68CZ6 603 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 GPR153Q6NV75 609 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 OTOP2Q7RTS6 562 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 METTL13Q8N6R0 699 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 TMEM40Q8WWA1 233 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 PNMA5Q96PV4 448 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 NACC1Q96RE7 527 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 RAB34Q9BZG1 259 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 SRPRBQ9Y5M8 271 aaKnown RBP13.86□□□□□ -0.19
RNF40-211ENST00000567365 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
RNF40-211ENST00000567365 SLC26A4O43511 780 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 BAIAP3O94812 1187 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 GHRP10912 638 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 CCT6AP40227 531 aaKnown RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 GPC3P51654 580 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 CRYBB1P53674 252 aaPredicted RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 GRB10Q13322 594 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 TMEM119Q4V9L6 283 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 FAM109BQ6ICB4 259 aaPredicted RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 KCTD17Q8N5Z5 321 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 USP38Q8NB14 1042 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
RNF40-211ENST00000567365 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
RNF40-211ENST00000567365 ABHD14A-ACY1A0A1B0GW23 586 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 GAS2O43903 313 aaKnown RBP13.84□□□□□ -0.19
RNF40-211ENST00000567365 DGAT1O75907 488 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 TMOD1P28289 359 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 ARL2P36404 184 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 NLRP11P59045 1033 aaKnown RBP13.84□□□□□ -0.19
RNF40-211ENST00000567365 EMC2Q15006 297 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 KRT79Q5XKE5 535 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 TSHZ1Q6ZSZ6 1077 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 USP49Q70CQ1 688 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 LINC01599Q8WXQ3 324 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 IFIH1Q9BYX4 1025 aaKnown RBP13.84□□□□□ -0.19
RNF40-211ENST00000567365 SUGCTQ9HAC7 445 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 SUCLA2Q9P2R7 463 aaPredicted RBP13.84□□□□□ -0.19
RNF40-211ENST00000567365 KIAA1024Q9UPX6 916 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 NOC2LQ9Y3T9 749 aaKnown RBP13.84□□□□□ -0.19
RNF40-211ENST00000567365 GBF1Q92538 1859 aa13.84□□□□□ -0.19
RNF40-211ENST00000567365 TTC3P53804 2025 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 YEATS4O95619 227 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 ACTN1P12814 892 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 CD52P31358 61 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 WDR5P61964 334 aaKnown RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 CDC42EP1Q00587 391 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms