RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FSTL4Q6MZW2 842 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 TUBA3EQ6PEY2 450 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 CHFRQ96EP1 664 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 DNAJC7Q99615 494 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 CELF4Q9BZC1 486 aaKnown RBP5.09□□□□□ -1.59
CDH1-211ENST00000567320 MSL2Q9HCI7 577 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 MAGEL2Q9UJ55 1249 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 GIT1Q9Y2X7 761 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
CDH1-211ENST00000567320 CYP27B1O15528 508 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 STAT3P40763 770 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 ATP2C1P98194 919 aaPredicted RBP5.08□□□□□ -1.6
CDH1-211ENST00000567320 IRF9Q00978 393 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 RIN1Q13671 783 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 ADGRE4PQ86SQ3 457 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 IGSF22Q8N9C0 903 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 GCDHQ92947 438 aaPredicted RBP5.08□□□□□ -1.6
CDH1-211ENST00000567320 SRPK1Q96SB4 655 aaKnown RBP5.08□□□□□ -1.6
CDH1-211ENST00000567320 MMRN2Q9H8L6 949 aa5.08□□□□□ -1.6
CDH1-211ENST00000567320 AURKAIP1Q9NWT8 199 aaPredicted RBP5.08□□□□□ -1.6
CDH1-211ENST00000567320 FAM221BA6H8Z2 402 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 RASSF10A6NK89 507 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 GOLGA6L22H0YM25 854 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 H2AFYO75367 372 aaKnown RBP5.07□□□□□ -1.6
CDH1-211ENST00000567320 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 OVCH1Q7RTY7 1134 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 BRAPQ7Z569 592 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 SLC7A14Q8TBB6 771 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 ZNF483Q8TF39 744 aaPredicted RBP5.07□□□□□ -1.6
CDH1-211ENST00000567320 CACTINQ8WUQ7 758 aaKnown RBP5.07□□□□□ -1.6
CDH1-211ENST00000567320 CEP89Q96ST8 783 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 IKZF4Q9H2S9 585 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 PARPBPQ9NWS1 579 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 SNTG2Q9NY99 539 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 SAE1Q9UBE0 346 aaPredicted RBP5.07□□□□□ -1.6
CDH1-211ENST00000567320 B3GALT1Q9Y5Z6 326 aa5.07□□□□□ -1.6
CDH1-211ENST00000567320 MAKP20794 623 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 SDHAP31040 664 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 HGFACQ04756 655 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 DPTQ07507 201 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
CDH1-211ENST00000567320 ACAP1Q15027 740 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 TMEM177Q53S58 311 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 CATSPEREQ5SY80 951 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 KLHDC10Q6PID8 442 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 GSTCDQ8NEC7 633 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 SCLYQ96I15 445 aa5.06□□□□□ -1.6
CDH1-211ENST00000567320 RPL10LQ96L21 214 aaKnown RBP5.06□□□□□ -1.6
CDH1-211ENST00000567320 AGO3Q9H9G7 860 aaKnown RBP5.06□□□□□ -1.6
CDH1-211ENST00000567320 RBM8AQ9Y5S9 174 aaKnown RBP5.06□□□□□ -1.6
CDH1-211ENST00000567320 A0A087X1B8 175 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 INHBCP55103 352 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 SESN2P58004 480 aaPredicted RBP5.05□□□□□ -1.6
CDH1-211ENST00000567320 SLC6A3Q01959 620 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 ALDH6A1Q02252 535 aaKnown RBP5.05□□□□□ -1.6
CDH1-211ENST00000567320 RASA3Q14644 834 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 KRT40Q6A162 431 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 GSPT2Q8IYD1 628 aaKnown RBP5.05□□□□□ -1.6
CDH1-211ENST00000567320 ANKRD35Q8N283 1001 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 ANKRD53Q8N9V6 530 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 PMFBP1Q8TBY8 1022 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 DLG3Q92796 817 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 E2F7Q96AV8 911 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 CLIP3Q96DZ5 547 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 PCIF1Q9H4Z3 704 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 IGSF5Q9NSI5 407 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 DENND2AQ9ULE3 1009 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 VWA7Q9Y334 891 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 SH3BP1Q9Y3L3 701 aa5.05□□□□□ -1.6
CDH1-211ENST00000567320 NPTXRO95502 500 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 KIF11P52732 1056 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 INHBEP58166 350 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 BPIFB4P59827 614 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 ROM1Q03395 351 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 SAFB2Q14151 953 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDH1-211ENST00000567320 RRP1BQ14684 758 aaKnown RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 SMN1Q16637 294 aaKnown RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 LRP10Q7Z4F1 713 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 FGD2Q7Z6J4 655 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 DDX53Q86TM3 631 aaKnown RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 RABGGTAQ92696 567 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 LPPQ93052 612 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 GFM2Q969S9 779 aaKnown RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 SLC7A6OSQ96CW6 309 aaPredicted RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 NCDNQ9UBB6 729 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 RCAN3Q9UKA8 241 aa5.04□□□□□ -1.6
CDH1-211ENST00000567320 CTDP1Q9Y5B0 961 aaPredicted RBP5.04□□□□□ -1.6
CDH1-211ENST00000567320 CCDC163A0A0D9SF12 145 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 RGS3P49796 1198 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 TCIRG1Q13488 830 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 SERINC3Q13530 473 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 DGKDQ16760 1214 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 TRIM61Q5EBN2 209 aa5.03□□□□□ -1.6
CDH1-211ENST00000567320 PRAMEF9Q5VWM5 478 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms