RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 WNT8AQ9H1J5 351 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 ATP6V0A4Q9HBG4 840 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 CHMP5Q9NZZ3 219 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
SF3B3-208ENST00000567250 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 UMODL1Q5DID0 1318 aa13.57□□□□□ -0.24
SF3B3-208ENST00000567250 MYH11P35749 1972 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 CUTAO60888 179 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 CYP2C18P33260 490 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 CCL23P55773 120 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 CDC42EP1Q00587 391 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 EMC2Q15006 297 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 ZNF618Q5T7W0 954 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 MCPH1Q8NEM0 835 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 PIGOQ8TEQ8 1089 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 DNAJB3Q8WWF6 145 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 TCP11Q8WWU5 503 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 WNT8BQ93098 351 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
SF3B3-208ENST00000567250 MTRQ99707 1265 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 TRPV2Q9Y5S1 764 aa13.56□□□□□ -0.24
SF3B3-208ENST00000567250 IGKV6-21A0A0C4DH24 114 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 USO1O60763 962 aaKnown RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 EYA4O95677 639 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 CTSHP09668 335 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 ITGB8P26012 769 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 CDC25AP30304 524 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 CLCN3P51790 818 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 NPEPPSP55786 919 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 PSRC1Q6PGN9 363 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 LRRC71Q8N4P6 559 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 SYMPKQ92797 1274 aaKnown RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 MMTAG2Q9BU76 263 aaKnown RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
SF3B3-208ENST00000567250 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
SF3B3-208ENST00000567250 ACTN1P12814 892 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 CSF2RAP15509 400 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 GRIN1Q05586 938 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 TMEM119Q4V9L6 283 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 ODR4Q5SWX8 454 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 PSPC1Q8WXF1 523 aaKnown RBP13.54□□□□□ -0.24
SF3B3-208ENST00000567250 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 SCLYQ96I15 445 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 CEP89Q96ST8 783 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 GDF15Q99988 308 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 PYM1Q9BRP8 204 aaKnown RBP13.54□□□□□ -0.24
SF3B3-208ENST00000567250 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
SF3B3-208ENST00000567250 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
SF3B3-208ENST00000567250 BHMT2Q9H2M3 363 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 IL23AQ9NPF7 189 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 RCOR1Q9UKL0 485 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 CDY2AQ9Y6F7 541 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 SQORQ9Y6N5 450 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
SF3B3-208ENST00000567250 ZBTB39O15060 712 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 VTNP04004 478 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 PLCG1P19174 1290 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 BMP8BP34820 402 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 MGAT3Q09327 533 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 GRB10Q13322 594 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 KARSQ15046 597 aaKnown RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 ECM1Q16610 540 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 CCDC73Q6ZRK6 1079 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 FAM43BQ6ZT52 329 aaPredicted RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 KIAA0319LQ8IZA0 1049 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 APBB2Q92870 758 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 PNMA5Q96PV4 448 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 TIPINQ9BVW5 301 aa13.53□□□□□ -0.24
SF3B3-208ENST00000567250 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
SF3B3-208ENST00000567250 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms