RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 UNC45AQ9H3U1 944 aa16.08■□□□□ 0.16
COMMD4-216ENST00000567023 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.16
COMMD4-216ENST00000567023 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
COMMD4-216ENST00000567023 C9IYK1 514 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 GRM6O15303 877 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 PFKFB2O60825 505 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 TDP2O95551 362 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 VTNP04004 478 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 KCNA5P22460 613 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 FAM189BP81408 668 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 PRKCEQ02156 737 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
COMMD4-216ENST00000567023 UGCGQ16739 394 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 EFCAB12Q6NXP0 572 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
COMMD4-216ENST00000567023 FAM228AQ86W67 206 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 OSMRQ99650 979 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 ADAM2Q99965 735 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 NIFKQ9BYG3 293 aaKnown RBP16.07■□□□□ 0.16
COMMD4-216ENST00000567023 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
COMMD4-216ENST00000567023 ADAMTS10Q9H324 1103 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 PLAGL2Q9UPG8 496 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
COMMD4-216ENST00000567023 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
COMMD4-216ENST00000567023 DENND3A2RUS2 1198 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 MMP1P03956 469 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 CLCN3P51790 818 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 NLRP11P59045 1033 aaKnown RBP16.06■□□□□ 0.16
COMMD4-216ENST00000567023 CAMK1Q14012 370 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
COMMD4-216ENST00000567023 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 CTC1Q2NKJ3 1217 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 PUS10Q3MIT2 529 aaKnown RBP16.06■□□□□ 0.16
COMMD4-216ENST00000567023 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 GJA10Q969M2 543 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
COMMD4-216ENST00000567023 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
COMMD4-216ENST00000567023 MYO7AQ13402 2215 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 GRXCR2A6NFK2 248 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 CHMP2AO43633 222 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 STBD1O95210 358 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 XBP1P17861 261 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 EIF4BP23588 611 aaKnown RBP16.05■□□□□ 0.16
COMMD4-216ENST00000567023 DSC3Q14574 896 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 MIER3Q7Z3K6 550 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 MAP7D2Q96T17 732 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
COMMD4-216ENST00000567023 KCNJ14Q9UNX9 436 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 C5orf42Q9H799 3197 aa16.05■□□□□ 0.16
COMMD4-216ENST00000567023 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 CDC42EP1Q00587 391 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 INF2Q27J81 1249 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 PAN2Q504Q3 1202 aaKnown RBP16.04■□□□□ 0.16
COMMD4-216ENST00000567023 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 SPPL3Q8TCT6 385 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 PPP1R16BQ96T49 567 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
COMMD4-216ENST00000567023 KCNMB3Q9NPA1 279 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 TMEM161AQ9NX61 479 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 AKT3Q9Y243 479 aa16.04■□□□□ 0.16
COMMD4-216ENST00000567023 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 SLC37A4O43826 429 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 EIF5BO60841 1220 aaKnown RBP16.03■□□□□ 0.16
COMMD4-216ENST00000567023 ITGB1P05556 798 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
COMMD4-216ENST00000567023 DNAJB1P25685 340 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 LTBRP36941 435 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 GATMP50440 423 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 GPC3P51654 580 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 AK2P54819 239 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 HYAL1Q12794 435 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 PPP2R5CQ13362 524 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 PTCRAQ6ISU1 281 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-216ENST00000567023 NEK8Q86SG6 692 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 FAM178BQ8IXR5 827 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 KLHL23Q8NBE8 558 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 ATG2AQ2TAZ0 1938 aa16.03■□□□□ 0.16
COMMD4-216ENST00000567023 FNDC1Q4ZHG4 1894 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-216ENST00000567023 CCDC194A0A1B0GVG4 234 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 H3BQ06 376 aaPredicted RBP16.02■□□□□ 0.16
COMMD4-216ENST00000567023 TBX3O15119 743 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
COMMD4-216ENST00000567023 LETM2Q2VYF4 491 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 WASF1Q92558 559 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.16
COMMD4-216ENST00000567023 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 VAV3Q9UKW4 847 aa16.02■□□□□ 0.16
COMMD4-216ENST00000567023 KIAA1671Q9BY89 1806 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 TBKBP1A7MCY6 615 aa16.01■□□□□ 0.15
COMMD4-216ENST00000567023 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms