RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 UGCGQ16739 394 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 ME3Q16798 604 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 FAM26DQ5JW98 314 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 FBXO47Q5MNV8 452 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 TSHZ1Q6ZSZ6 1077 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 DAGLBQ8NCG7 672 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 APBB2Q92870 758 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 RAD9AQ99638 391 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 C17orf80Q9BSJ5 609 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 PHF20Q9BVI0 1012 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 DISC1Q9NRI5 854 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 SEPT9Q9UHD8 586 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 AKT3Q9Y243 479 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 PCDHA2Q9Y5H9 948 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 COL1A2P08123 1366 aa11.41□□□□□ -0.58
GTF3C1-206ENST00000566779 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 CCNT1O60563 726 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 ATG7O95352 703 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 VTNP04004 478 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 OATP04181 439 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 ATP4AP20648 1035 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 KRT2P35908 639 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 USP11P51784 963 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 JAK3P52333 1124 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 GUCY1B3Q02153 619 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 NPY5RQ15761 445 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 KIZQ2M2Z5 673 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 MTERF2Q49AM1 385 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 PAN2Q504Q3 1202 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 ZNF484Q5JVG2 852 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 NEK8Q86SG6 692 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 CCDC83Q8IWF9 413 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 LRRC71Q8N4P6 559 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 FAM167AQ96KS9 214 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 OSMRQ99650 979 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 CELF4Q9BZC1 486 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 AGO3Q9H9G7 860 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 THEGQ9P2T0 379 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 INSL6Q9Y581 213 aa11.4□□□□□ -0.58
GTF3C1-206ENST00000566779 CUL9Q8IWT3 2517 aa11.4□□□□□ -0.59
GTF3C1-206ENST00000566779 CDH23Q9H251 3354 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 IGKV6D-21A0A0A0MT36 114 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 TMEM150BA6NC51 233 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 C22orf31O95567 290 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 CTNNB1P35222 781 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 NR5A1Q13285 461 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 NCAPH2Q6IBW4 605 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 BANK1Q8NDB2 785 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 NSUN7Q8NE18 718 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 RIT2Q99578 217 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 PLXNA4Q9HCM2 1894 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 LRFN2Q9ULH4 789 aa11.39□□□□□ -0.59
GTF3C1-206ENST00000566779 CHD9Q3L8U1 2897 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 DENND3A2RUS2 1198 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 M0R2N6 131 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 EDIL3O43854 480 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 SFNP31947 248 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 TBC1D8BQ0IIM8 1120 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 Q4G0T1 1027 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 EARS2Q5JPH6 523 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 EFCAB12Q6NXP0 572 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 EP400NLQ6ZTU2 488 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 HOMEZQ8IX15 550 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 NRBP2Q9NSY0 501 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 PADI3Q9ULW8 664 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 CEP131Q9UPN4 1083 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 MAFBQ9Y5Q3 323 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 MTCH2Q9Y6C9 303 aa11.38□□□□□ -0.59
GTF3C1-206ENST00000566779 ADGRA3Q8IWK6 1321 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 ZNF862O60290 1169 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 RPS6KA5O75582 802 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 PSMD10O75832 226 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 RPLP2P05387 115 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 FDPSP14324 419 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 ERVK-21P61565 698 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 GNL2Q13823 731 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 BTG3Q14201 252 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms