RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PRR33A8MZF0 331 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 EDIL3O43854 480 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 DNAJB1P25685 340 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 NLRP5P59047 1200 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 DLX2Q07687 328 aaPredicted RBP16.95■□□□□ 0.3
RNF40-209ENST00000566703 SMAD4Q13485 552 aaKnown RBP16.95■□□□□ 0.3
RNF40-209ENST00000566703 DSC3Q14574 896 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 PDE12Q6L8Q7 609 aaKnown RBP16.95■□□□□ 0.3
RNF40-209ENST00000566703 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 RUFY3Q7L099 469 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 FAM228AQ86W67 206 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 LINC01465Q8N7H1 131 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 EFHBQ8N7U6 833 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 UIMC1Q96RL1 719 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 OSMRQ99650 979 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 IGFLR1Q9H665 355 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 ATP6V0A4Q9HBG4 840 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 DISC1Q9NRI5 854 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 CD207Q9UJ71 328 aa16.95■□□□□ 0.3
RNF40-209ENST00000566703 FSD2A1L4K1 749 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 MSH4O15457 936 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 DCXO43602 365 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 EYA4O95677 639 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 GATMP50440 423 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 JAK3P52333 1124 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 SLC5A5Q92911 643 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
RNF40-209ENST00000566703 MSLNLQ96KJ4 702 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 MAP7D2Q96T17 732 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 TM6SF1Q9BZW5 370 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 VPS54Q9P1Q0 977 aa16.94■□□□□ 0.3
RNF40-209ENST00000566703 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 TBKBP1A7MCY6 615 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 HOXA2O43364 376 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 ZNF862O60290 1169 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 GAS7O60861 476 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 TBX10O75333 385 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 VTNP04004 478 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 OATP04181 439 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 EIF4BP23588 611 aaKnown RBP16.93■□□□□ 0.3
RNF40-209ENST00000566703 CYP3A7P24462 503 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 GTF2F1P35269 517 aaKnown RBP eCLIP16.93■□□□□ 0.3
RNF40-209ENST00000566703 IRS1P35568 1242 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 NLRP11P59045 1033 aaKnown RBP16.93■□□□□ 0.3
RNF40-209ENST00000566703 CCT2P78371 535 aaKnown RBP16.93■□□□□ 0.3
RNF40-209ENST00000566703 CDC42EP1Q00587 391 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 SSRP1Q08945 709 aaKnown RBP16.93■□□□□ 0.3
RNF40-209ENST00000566703 Q4G0T1 1027 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 SPOUT1Q5T280 376 aaKnown RBP16.93■□□□□ 0.3
RNF40-209ENST00000566703 FAM102BQ5T8I3 360 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 TEKT3Q9BXF9 490 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 ADAMTS10Q9H324 1103 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 PCDHA4Q9UN74 947 aa16.93■□□□□ 0.3
RNF40-209ENST00000566703 XIRP2A4UGR9 3374 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 FAM86C2PA6NEL3 165 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 LINC01565O15544 149 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 DEXIO95424 95 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 LAG3P18627 525 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 NDUFV1P49821 464 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 CLCN3P51790 818 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 COASYQ13057 564 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 CPLX2Q6PUV4 134 aaKnown RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 TRMT1LQ7Z2T5 733 aaKnown RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 MICAL1Q8TDZ2 1067 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 TBCKQ8TEA7 893 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 TMEM117Q9H0C3 514 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 NCOA5Q9HCD5 579 aaKnown RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 TYW1Q9NV66 732 aaKnown RBP16.92■□□□□ 0.3
RNF40-209ENST00000566703 AKT3Q9Y243 479 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
RNF40-209ENST00000566703 MYO7AQ13402 2215 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 PSMD10O75832 226 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 FGF18O76093 207 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 PLCB3Q01970 1234 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
RNF40-209ENST00000566703 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
RNF40-209ENST00000566703 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 MOXD1Q6UVY6 613 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 ADGRD2Q7Z7M1 963 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 COLGALT1Q8NBJ5 622 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 PPP1R16BQ96T49 567 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
RNF40-209ENST00000566703 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 CWH43Q9H720 699 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 TLE6Q9H808 572 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 TLR9Q9NR96 1032 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 CLEC1BQ9P126 229 aa16.91■□□□□ 0.3
RNF40-209ENST00000566703 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
RNF40-209ENST00000566703 BDP1A6H8Y1 2624 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms