RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SIX2Q9NPC8 291 aa20.48■□□□□ 0.87
MSLN-207ENST00000566549 PRDM4Q9UKN5 801 aa20.48■□□□□ 0.87
MSLN-207ENST00000566549 TULP1O00294 542 aaPredicted RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 MYCLP12524 364 aaPredicted RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 PSMC2P35998 433 aaKnown RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 TNNT3P45378 269 aaPredicted RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 HS2ST1Q7LGA3 356 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 TEX2Q8IWB9 1127 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 DAW1Q8N136 415 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 MS4A14Q96JA4 679 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 TAAR1Q96RJ0 339 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 RIT2Q99578 217 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 LUC7LQ9NQ29 371 aaKnown RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 AGPAT3Q9NRZ7 376 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 N4BP1O75113 896 aaKnown RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 ZNF131P52739 623 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 PADI6Q6TGC4 694 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 SYCP3Q8IZU3 236 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 SYTL5Q8TDW5 730 aaPredicted RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 BORCS6Q96GS4 357 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 BCS1LQ9Y276 419 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 CTDP1Q9Y5B0 961 aaPredicted RBP20.47■□□□□ 0.87
MSLN-207ENST00000566549 SRCAPQ6ZRS2 3230 aa20.47■□□□□ 0.87
MSLN-207ENST00000566549 LRRIQ3A6PVS8 624 aaPredicted RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 K7ENM7 598 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 NFKBIEO00221 500 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 MYBL2P10244 700 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 TCP1P17987 556 aaKnown RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 VCAM1P19320 739 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 RPS6P62753 249 aaKnown RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 MTMR1Q13613 665 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 PTPROQ16827 1216 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 PRAMEF18Q5VWM3 479 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 IQCEQ6IPM2 695 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 MICALL2Q8IY33 904 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 RNF10Q8N5U6 811 aaKnown RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 SPATA4Q8NEY3 305 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 WNK4Q96J92 1243 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 SLC38A10Q9HBR0 1119 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 ZHX2Q9Y6X8 837 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 RPTORQ8N122 1335 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 TISP43B9A030 160 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 DHX15O43143 795 aaKnown RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
MSLN-207ENST00000566549 MAPK7Q13164 816 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 NAB2Q15742 525 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 NSMFQ6X4W1 530 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 HDAC7Q8WUI4 952 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 LPAR1Q92633 364 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 ODF2LQ9ULJ1 636 aa20.46■□□□□ 0.87
MSLN-207ENST00000566549 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 TNIP1Q15025 636 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 CBWD6Q4V339 395 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 CBWD3Q5JTY5 395 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 CBWD5Q5RIA9 395 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 NBPF12Q5TAG4 269 aaPredicted RBP20.45■□□□□ 0.86
MSLN-207ENST00000566549 LRRC1Q9BTT6 524 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 KIAA1683Q9H0B3 1180 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 GOLPH3Q9H4A6 298 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
MSLN-207ENST00000566549 AGO4Q9HCK5 861 aaKnown RBP20.45■□□□□ 0.86
MSLN-207ENST00000566549 SEL1LQ9UBV2 794 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 FRMD4BQ9Y2L6 1034 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 KIF13BQ9NQT8 1826 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 GFPT2O94808 682 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 TUBBP07437 444 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 SPP2Q13103 211 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 DEFB129Q9H1M3 183 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 PCIF1Q9H4Z3 704 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
MSLN-207ENST00000566549 ERICH4A6NGS2 130 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 P4HBP07237 508 aaKnown RBP20.44■□□□□ 0.86
MSLN-207ENST00000566549 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
MSLN-207ENST00000566549 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
MSLN-207ENST00000566549 SLC7A5Q01650 507 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 EXOC3O60645 756 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 PRLRP16471 622 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 MUTP22033 750 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 GUCY2CP25092 1073 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 STXBP4Q6ZWJ1 553 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 CCDC102AQ96A19 550 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 KCND2Q9NZV8 630 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 PPP1R9AQ9ULJ8 1098 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 UBIAD1Q9Y5Z9 338 aa20.44■□□□□ 0.86
MSLN-207ENST00000566549 RBBP6Q7Z6E9 1792 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 TARSL2A2RTX5 802 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 BCRP11274 1271 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 FMO5P49326 533 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 UGCGQ16739 394 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 PCNX4Q63HM2 1172 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 ZKSCAN4Q969J2 545 aaPredicted RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 ATG4CQ96DT6 458 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 CCDC43Q96MW1 224 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 PLEKHA4Q9H4M7 779 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms