RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 KIZQ2M2Z5 673 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 TMCO2Q7Z6W1 182 aaPredicted RBP14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 USP38Q8NB14 1042 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 MAP7D2Q96T17 732 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 HSD17B14Q9BPX1 270 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 NKX2-4Q9H2Z4 354 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 SEMA6BQ9H3T3 888 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 SUGCTQ9HAC7 445 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 CYP26B1Q9NR63 512 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 AKT3Q9Y243 479 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 GINS2Q9Y248 185 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 SQORQ9Y6N5 450 aa14.43□□□□□ -0.1
CNEP1R1-208ENST00000566482 IGKV6-21A0A0C4DH24 114 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 VPS37CA5D8V6 355 aaPredicted RBP14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 ZBTB39O15060 712 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 GPR32O75388 356 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 PDCP20941 246 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 YWHABP31946 246 aaKnown RBP14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 PTGDRQ13258 359 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 DRP2Q13474 957 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 RILPL1Q5EBL4 403 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 HSCBQ8IWL3 235 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 CEP170P1Q96L14 293 aa14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
CNEP1R1-208ENST00000566482 MAFO75444 373 aaPredicted RBP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 LYPLA2O95372 231 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 AMHP03971 560 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 CRYBB1P53674 252 aaPredicted RBP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 NLRP11P59045 1033 aaKnown RBP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 PAK2Q13177 524 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 TMEM266Q2M3C6 531 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 FAM117BQ6P1L5 589 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 OTUD6AQ7L8S5 288 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 MYOCDQ8IZQ8 938 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 TMEM40Q8WWA1 233 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 ZNF668Q96K58 619 aaPredicted RBP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 OSMRQ99650 979 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 ADAMTS10Q9H324 1103 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 ZNF576Q9H609 170 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 PADI3Q9ULW8 664 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 PPME1Q9Y570 386 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 LOXHD1Q8IVV2 1947 aa14.41□□□□□ -0.1
CNEP1R1-208ENST00000566482 LAD1O00515 517 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 TLL1O43897 1013 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 MED24O75448 989 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 GJB5O95377 273 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 SYT1P21579 422 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 RFC5P40937 340 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 DNM2P50570 870 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 GPC3P51654 580 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 POLGP54098 1239 aaPredicted RBP14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 XKR9Q5GH70 373 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 BRAPQ7Z569 592 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 FERMT3Q86UX7 667 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 LINC01599Q8WXQ3 324 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 GUCD1Q96NT3 240 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 JPH2Q9BR39 696 aaPredicted RBP14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 SLC28A3Q9HAS3 691 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 ERVK-5Q9HDB9 667 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 TUFT1Q9NNX1 390 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 ARID2Q68CP9 1835 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 CHD9Q3L8U1 2897 aa14.4□□□□□ -0.1
CNEP1R1-208ENST00000566482 A0A087WWV3 80 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 ENPP3O14638 875 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 ARHGEF15O94989 841 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 CA3P07451 260 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 PRPHP41219 470 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 NFX1Q12986 1120 aaKnown RBP14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 IL17AQ16552 155 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 CATSPER3Q86XQ3 398 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 ERMNQ8TAM6 284 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 PIGOQ8TEQ8 1089 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 SCLT1Q96NL6 688 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 RAD9AQ99638 391 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 TMX1Q9H3N1 280 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 BMP2KQ9NSY1 1161 aaPredicted RBP14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 ANKEF1Q9NU02 776 aa14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 SUCLA2Q9P2R7 463 aaPredicted RBP14.39□□□□□ -0.11
CNEP1R1-208ENST00000566482 LCHNA4D1U4 455 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 MGEA5O60502 916 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 UPP2O95045 317 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 RPA1P27694 616 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 ATP2C1P98194 919 aaPredicted RBP14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 GRIN2CQ14957 1233 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 EMC2Q15006 297 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 ODR4Q5SWX8 454 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 POTEGQ6S5H5 508 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms