RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NEK9Q8TD19 979 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 PABPC5Q96DU9 382 aaKnown RBP20.68■□□□□ 0.9
USB1-213ENST00000566292 MBOAT7Q96N66 472 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 ADAM2Q99965 735 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 PLVAPQ9BX97 442 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 ALG13Q9NP73 1137 aaKnown RBP20.68■□□□□ 0.9
USB1-213ENST00000566292 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 PPP4R2Q9NY27 417 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 LRFN2Q9ULH4 789 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 KCNJ14Q9UNX9 436 aa20.68■□□□□ 0.9
USB1-213ENST00000566292 C9IYK1 514 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 H3BQ06 376 aaPredicted RBP20.67■□□□□ 0.9
USB1-213ENST00000566292 GPR182O15218 404 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 MMP1P03956 469 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 CAMK1Q14012 370 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 ODR4Q5SWX8 454 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 GALNT17Q6IS24 598 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 FAM43BQ6ZT52 329 aaPredicted RBP20.67■□□□□ 0.9
USB1-213ENST00000566292 LRRC71Q8N4P6 559 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 ETNPPLQ8TBG4 499 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 P2RX5Q93086 422 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 ADAMTS10Q9H324 1103 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 NRBP2Q9NSY0 501 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 TPCN1Q9ULQ1 816 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 PLAGL2Q9UPG8 496 aa20.67■□□□□ 0.9
USB1-213ENST00000566292 DENND3A2RUS2 1198 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 IL9P15248 144 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
USB1-213ENST00000566292 DSC3Q14574 896 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 NONOQ15233 471 aaKnown RBP eCLIP20.66■□□□□ 0.9
USB1-213ENST00000566292 INF2Q27J81 1249 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 MOXD1Q6UVY6 613 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 PHF20Q9BVI0 1012 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 SLKQ9H2G2 1235 aaPredicted RBP20.66■□□□□ 0.9
USB1-213ENST00000566292 CD320Q9NPF0 282 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 C1orf112Q9NSG2 853 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 AKT3Q9Y243 479 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 PCDHB7Q9Y5E2 793 aa20.66■□□□□ 0.9
USB1-213ENST00000566292 STK36Q9NRP7 1315 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 PFKFB2O60825 505 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 CSPG5O95196 566 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 ITGB1P05556 798 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 DNAJB1P25685 340 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 TARBP2Q15633 366 aaKnown RBP20.65■□□□□ 0.9
USB1-213ENST00000566292 PTCRAQ6ISU1 281 aaPredicted RBP20.65■□□□□ 0.9
USB1-213ENST00000566292 SLC24A5Q71RS6 500 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 KRT25Q7Z3Z0 450 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 RDM1Q8NG50 284 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 SPPL3Q8TCT6 385 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 KHSRPQ92945 711 aaKnown RBP eCLIP20.65■□□□□ 0.9
USB1-213ENST00000566292 MAP7D2Q96T17 732 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 GJB4Q9NTQ9 266 aa20.65■□□□□ 0.9
USB1-213ENST00000566292 TMEM150BA6NC51 233 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 GRXCR2A6NFK2 248 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 SLC37A4O43826 429 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 CDKL5O76039 1030 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 STBD1O95210 358 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 CTDNEP1O95476 244 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 TMOD1P28289 359 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 LTBRP36941 435 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 FAM189BP81408 668 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 HYAL1Q12794 435 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 CTC1Q2NKJ3 1217 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 NAALADL2Q58DX5 795 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 FAM102BQ5T8I3 360 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 EP400NLQ6ZTU2 488 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 FAM178BQ8IXR5 827 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 KLHL23Q8NBE8 558 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 ZNF668Q96K58 619 aaPredicted RBP20.64■□□□□ 0.89
USB1-213ENST00000566292 CEP89Q96ST8 783 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 CLDND1Q9NY35 253 aa20.64■□□□□ 0.89
USB1-213ENST00000566292 DDX25Q9UHL0 483 aaKnown RBP20.64■□□□□ 0.89
USB1-213ENST00000566292 GTF2F1P35269 517 aaKnown RBP eCLIP20.63■□□□□ 0.89
USB1-213ENST00000566292 ANAPC15P60006 121 aa20.63■□□□□ 0.89
USB1-213ENST00000566292 EPHX3Q9H6B9 360 aa20.63■□□□□ 0.89
USB1-213ENST00000566292 HCSTQ9UBK5 93 aa20.63■□□□□ 0.89
USB1-213ENST00000566292 TBKBP1A7MCY6 615 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 FGFR1P11362 822 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 COL9A1P20849 921 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 EIF4BP23588 611 aaKnown RBP20.62■□□□□ 0.89
USB1-213ENST00000566292 GPC3P51654 580 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 AK2P54819 239 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 TBC1D8BQ0IIM8 1120 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 DRP2Q13474 957 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 LETM2Q2VYF4 491 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 OXER1Q8TDS5 423 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 SH2D3AQ9BRG2 576 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 NIFKQ9BYG3 293 aaKnown RBP20.62■□□□□ 0.89
USB1-213ENST00000566292 TMEM161AQ9NX61 479 aa20.62■□□□□ 0.89
USB1-213ENST00000566292 SEPT9Q9UHD8 586 aaPredicted RBP20.62■□□□□ 0.89
USB1-213ENST00000566292 CCDC194A0A1B0GVG4 234 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 NCK2O43639 380 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 IRS1P35568 1242 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 DLX2Q07687 328 aaPredicted RBP20.61■□□□□ 0.89
USB1-213ENST00000566292 PUS10Q3MIT2 529 aaKnown RBP20.61■□□□□ 0.89
USB1-213ENST00000566292 MTERF2Q49AM1 385 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 XKR3Q5GH77 459 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 POF1BQ8WVV4 589 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 ELAC1Q9H777 363 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms