RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 PCDHA10Q9Y5I2 948 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 DENND3A2RUS2 1198 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 GPR182O15218 404 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 ZNF862O60290 1169 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 GLP2RO95838 553 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 PSAPP07602 524 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 GNA11P29992 359 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 HOXD11P31277 338 aaPredicted RBP21.32■■□□□ 1
ABCA3-204ENST00000566200 FAM189BP81408 668 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 FAM43BQ6ZT52 329 aaPredicted RBP21.32■■□□□ 1
ABCA3-204ENST00000566200 EFHBQ8N7U6 833 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 RNF26Q9BY78 433 aaPredicted RBP21.32■■□□□ 1
ABCA3-204ENST00000566200 VPS54Q9P1Q0 977 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 CD207Q9UJ71 328 aa21.32■■□□□ 1
ABCA3-204ENST00000566200 TBKBP1A7MCY6 615 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 FGFR1P11362 822 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 IFNAR1P17181 557 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 NRIP1P48552 1158 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 CLCN3P51790 818 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 EVCP57679 992 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 METTL13Q8N6R0 699 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 SLC26A6Q9BXS9 759 aa21.31■■□□□ 1
ABCA3-204ENST00000566200 NCOA5Q9HCD5 579 aaKnown RBP21.31■■□□□ 1
ABCA3-204ENST00000566200 MSH4O15457 936 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 EYA4O95677 639 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 PDIA3P30101 505 aaKnown RBP21.3■■□□□ 1
ABCA3-204ENST00000566200 NDUFV1P49821 464 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 UGCGQ16739 394 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 RBM23Q86U06 439 aaKnown RBP21.3■■□□□ 1
ABCA3-204ENST00000566200 ADAMTS10Q9H324 1103 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 CWH43Q9H720 699 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 RNF19AQ9NV58 838 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 TYW1Q9NV66 732 aaKnown RBP21.3■■□□□ 1
ABCA3-204ENST00000566200 TMEM161AQ9NX61 479 aa21.3■■□□□ 1
ABCA3-204ENST00000566200 WDR64B1ANS9 1081 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 ERVFC1P60507 584 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
ABCA3-204ENST00000566200 RBM10P98175 930 aaKnown RBP21.29■■□□□ 1
ABCA3-204ENST00000566200 ODR4Q5SWX8 454 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 EFCAB12Q6NXP0 572 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 LRRC71Q8N4P6 559 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 COLGALT1Q8NBJ5 622 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 SMRP1Q8NCR6 262 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 GJA10Q969M2 543 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 CEP131Q9UPN4 1083 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 SAMM50Q9Y512 469 aa21.29■■□□□ 1
ABCA3-204ENST00000566200 MAGEB2O15479 319 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 FGF18O76093 207 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 OATP04181 439 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 NLRP11P59045 1033 aaKnown RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 UBE3AQ05086 875 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 COASYQ13057 564 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 SPOUT1Q5T280 376 aaKnown RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 CCDC148Q8NFR7 591 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 BICD2Q8TD16 824 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 SLC5A5Q92911 643 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 PPP2R3CQ969Q6 453 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 CCDC136Q96JN2 1154 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 ELAC1Q9H777 363 aaKnown RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 DISC1Q9NRI5 854 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 BARX2Q9UMQ3 279 aaPredicted RBP21.28■■□□□ 1
ABCA3-204ENST00000566200 PCDHB12Q9Y5F1 795 aa21.28■■□□□ 1
ABCA3-204ENST00000566200 PER2O15055 1255 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 PRKCEQ02156 737 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 LRRC55Q6ZSA7 311 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 RNF135Q8IUD6 432 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 ZNF668Q96K58 619 aaPredicted RBP21.27■■□□□ 1
ABCA3-204ENST00000566200 FAM167AQ96KS9 214 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 POP1Q99575 1024 aaKnown RBP21.27■■□□□ 1
ABCA3-204ENST00000566200 RIT2Q99578 217 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 UNC45AQ9H3U1 944 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 ATP6V0A4Q9HBG4 840 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 TLR9Q9NR96 1032 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 TCEAL9Q9UHQ7 104 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 MUTYHQ9UIF7 546 aa21.27■■□□□ 1
ABCA3-204ENST00000566200 TRIOO75962 3097 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 FSCN2O14926 492 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 USP11P51784 963 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 HERC4Q5GLZ8 1057 aaPredicted RBP21.26■□□□□ 0.99
ABCA3-204ENST00000566200 CASD1Q96PB1 797 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 UPF3BQ9BZI7 483 aaKnown RBP21.26■□□□□ 0.99
ABCA3-204ENST00000566200 TLE6Q9H808 572 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 SH3GLB2Q9NR46 395 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 AAASQ9NRG9 546 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
ABCA3-204ENST00000566200 AKT3Q9Y243 479 aa21.26■□□□□ 0.99
ABCA3-204ENST00000566200 CHMP2AO43633 222 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 STBD1O95210 358 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 EIF4BP23588 611 aaKnown RBP21.25■□□□□ 0.99
ABCA3-204ENST00000566200 PSMA5P28066 241 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 GPC3P51654 580 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 TARBP2Q15633 366 aaKnown RBP21.25■□□□□ 0.99
ABCA3-204ENST00000566200 NPY5RQ15761 445 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 CSPP1Q1MSJ5 1256 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 RUFY3Q7L099 469 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 THNSL1Q8IYQ7 743 aa21.25■□□□□ 0.99
ABCA3-204ENST00000566200 TBCKQ8TEA7 893 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms