RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZSWIM4Q9H7M6 989 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 SUGCTQ9HAC7 445 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 RNF216Q9NWF9 866 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-211ENST00000565922 COL4A4P53420 1690 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-211ENST00000565922 CD2BP2O95400 341 aaKnown RBP22.25■■□□□ 1.15
CMTM3-211ENST00000565922 VTNP04004 478 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 ATP2B1P20020 1258 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 TXKP42681 527 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 KIZQ2M2Z5 673 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 LRRC71Q8N4P6 559 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 MTMR9Q96QG7 549 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
CMTM3-211ENST00000565922 LCHNA4D1U4 455 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 ENPP3O14638 875 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 GPR32O75388 356 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 UPP2O95045 317 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 STBD1O95210 358 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 U2AF2P26368 475 aaKnown RBP eCLIP22.24■■□□□ 1.15
CMTM3-211ENST00000565922 NFX1Q12986 1120 aaKnown RBP22.24■■□□□ 1.15
CMTM3-211ENST00000565922 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 ANO5Q75V66 913 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 SLC7A3Q8WY07 619 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 SCLT1Q96NL6 688 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 OSMRQ99650 979 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 CYP26B1Q9NR63 512 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
CMTM3-211ENST00000565922 COL6A3P12111 3177 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 MAFO75444 373 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 GJB2P29033 226 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 YWHABP31946 246 aaKnown RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 NLRP11P59045 1033 aaKnown RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 SP7Q8TDD2 431 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 DYDC2Q96IM9 177 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 CEP170P1Q96L14 293 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 SAMD11Q96NU1 681 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 TGS1Q96RS0 853 aaKnown RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 TSPYL2Q9H2G4 693 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 ERVK-5Q9HDB9 667 aa22.23■■□□□ 1.15
CMTM3-211ENST00000565922 NOC2LQ9Y3T9 749 aaKnown RBP22.23■■□□□ 1.15
CMTM3-211ENST00000565922 IGKV6-21A0A0C4DH24 114 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 LINC01553A4QN01 128 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 H3BQV1 296 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 WNT7AO00755 349 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 GTPBP6O43824 516 aaPredicted RBP22.22■■□□□ 1.15
CMTM3-211ENST00000565922 GAS2O43903 313 aaKnown RBP22.22■■□□□ 1.15
CMTM3-211ENST00000565922 OR52Z1P0C646 297 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 STAG3L1P0CL83 205 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 RFC5P40937 340 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 GPC3P51654 580 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 CYP4A11Q02928 519 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 CEP89Q96ST8 783 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 PPP1R16BQ96T49 567 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 EIF2AK1Q9BQI3 630 aaKnown RBP22.22■■□□□ 1.15
CMTM3-211ENST00000565922 C1orf112Q9NSG2 853 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 RGL1Q9NZL6 768 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 CHD9Q3L8U1 2897 aa22.22■■□□□ 1.15
CMTM3-211ENST00000565922 DENND3A2RUS2 1198 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 TMEM150BA6NC51 233 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 IGFBP4P22692 258 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 EIF4BP23588 611 aaKnown RBP22.21■■□□□ 1.15
CMTM3-211ENST00000565922 POLGP54098 1239 aaPredicted RBP22.21■■□□□ 1.15
CMTM3-211ENST00000565922 ERVK-21P61565 698 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 TMEM266Q2M3C6 531 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 PLA2G4FQ68DD2 849 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 NPAS4Q8IUM7 802 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 TPH2Q8IWU9 490 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 TMEM40Q8WWA1 233 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 NLRP7Q8WX94 980 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 CCDC43Q96MW1 224 aaKnown RBP22.21■■□□□ 1.15
CMTM3-211ENST00000565922 TMEM60Q9H2L4 133 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 CERS4Q9HA82 394 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 CDHR5Q9HBB8 845 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 ST3GAL5Q9UNP4 418 aa22.21■■□□□ 1.15
CMTM3-211ENST00000565922 SLITRK3O94933 977 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 LYPLA2O95372 231 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 CTTNQ14247 550 aaKnown RBP22.2■■□□□ 1.14
CMTM3-211ENST00000565922 ZNF174Q15697 407 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 MCTP1Q6DN14 999 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 ZNF410Q86VK4 478 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 FAM228AQ86W67 206 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 ERMNQ8TAM6 284 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 LINC01599Q8WXQ3 324 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 HSD17B14Q9BPX1 270 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 SH2D3AQ9BRG2 576 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 ADAMTS10Q9H324 1103 aa22.2■■□□□ 1.14
CMTM3-211ENST00000565922 WRAP73Q9P2S5 460 aaPredicted RBP22.2■■□□□ 1.14
CMTM3-211ENST00000565922 FNDC1Q4ZHG4 1894 aaPredicted RBP22.2■■□□□ 1.14
CMTM3-211ENST00000565922 POTEMA6NI47 508 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 ARHGEF15O94989 841 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 ADGRE1Q14246 886 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 XKR9Q5GH70 373 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 TCP11Q8WWU5 503 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 GCOM2Q9BZD3 368 aaPredicted RBP22.19■■□□□ 1.14
CMTM3-211ENST00000565922 INO80BQ9C086 356 aaPredicted RBP22.19■■□□□ 1.14
CMTM3-211ENST00000565922 TMX1Q9H3N1 280 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 DHX33Q9H6R0 707 aaKnown RBP22.19■■□□□ 1.14
CMTM3-211ENST00000565922 ANKEF1Q9NU02 776 aa22.19■■□□□ 1.14
CMTM3-211ENST00000565922 SUCLA2Q9P2R7 463 aaPredicted RBP22.19■■□□□ 1.14
CMTM3-211ENST00000565922 LRFN2Q9ULH4 789 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms