RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 KCNH1O95259 989 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 USP8P40818 1118 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 HNF4AP41235 474 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 STAT1P42224 750 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 GABREP78334 506 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PCBP1Q15365 356 aaKnown RBP eCLIP3.39□□□□□ -1.879e-6■■■■■ 29.7
CHD9-216ENST00000565803 PCBP2Q15366 365 aaKnown RBP eCLIP3.39□□□□□ -1.871e-19■■■■■ 48.7
CHD9-216ENST00000565803 KIF4BQ2VIQ3 1234 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 MUM1L1Q5H9M0 696 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 RAB12Q6IQ22 244 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 RGS9BPQ6ZS82 235 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CCDC84Q86UT8 332 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 WDR63Q8IWG1 891 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SYNPOQ8N3V7 929 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ABTB2Q8N961 1025 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SUN5Q8TC36 379 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ZNF516Q92618 1163 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 HSPBAP1Q96EW2 488 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 HERC5Q9UII4 1024 aaKnown RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 INVSQ9Y283 1065 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CNTNAP4Q9C0A0 1308 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 GSG1L2A8MUP6 293 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 AGRPO00253 132 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 DDX3XO00571 662 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD9-216ENST00000565803 RIPK2O43353 540 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 TLL1O43897 1013 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 DIAPH2O60879 1101 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 TSC22D2O75157 780 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 EPN2O95208 641 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 RAG1P15918 1043 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ATP4AP20648 1035 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ATP5F1P24539 256 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 WEE1P30291 646 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CYP2C19P33261 490 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CRKP46108 304 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CDR1P51861 262 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRR20EP86478 221 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRR20CP86479 221 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRR20DP86480 221 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRR20BP86481 221 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRR20AP86496 221 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 USP4Q13107 963 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SPARCL1Q14515 664 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ACAP1Q15027 740 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 TMEM67Q5HYA8 995 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 GPR158Q5T848 1215 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRPF40BQ6NWY9 871 aaKnown RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 RUFY4Q6ZNE9 571 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ELOA2Q8IYF1 753 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 TBC1D21Q8IYX1 336 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 AFAP1L2Q8N4X5 818 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 GBP7Q8N8V2 638 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 ZNF527Q8NB42 609 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ARMC2Q8NEN0 867 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 LILRB1Q8NHL6 650 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 SPATA18Q8TC71 538 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 LZTS2Q9BRK4 669 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 FAM204AQ9H8W3 233 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CTNNA3Q9UI47 895 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 HOOK1Q9UJC3 728 aaKnown RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 SRPK3Q9UPE1 567 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ANO9A1A5B4 782 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 NEMP1O14524 444 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 TLR5O60602 858 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ZKSCAN1P17029 563 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 CCNCP24863 283 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 EPS15P42566 896 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PHKA1P46020 1223 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SULT1E1P49888 294 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 MRE11P49959 708 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CLNS1AP54105 237 aaKnown RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 SCAND1P57086 179 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 DGKZQ13574 1117 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 KCNB1Q14721 858 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 STARD3Q14849 445 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 MYBPC3Q14896 1274 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SV2CQ496J9 727 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 HSP90AA5PQ58FG0 334 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 C1orf141Q5JVX7 400 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 FAM209AQ5JX71 171 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 KDELC1Q6UW63 502 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 ANGPTL8Q6UXH0 198 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 KIAA1211Q6ZU35 1233 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CHD1LQ86WJ1 897 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 LSMEM1Q8N8F7 131 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 NAT8LQ8N9F0 302 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 CASP10Q92851 521 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SHDQ96IW2 340 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 EPSTI1Q96J88 318 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 GBP5Q96PP8 586 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 FNBP1Q96RU3 617 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SERINC2Q96SA4 455 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 NAA15Q9BXJ9 866 aaKnown RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 KLF16Q9BXK1 252 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 CYP4F11Q9HBI6 524 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 PRDM5Q9NQX1 630 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 HPF1Q9NWY4 346 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 DACT1Q9NYF0 836 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms