RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RWDD3Q9Y3V2 267 aa26.84■■□□□ 1.89
RAB40C-209ENST00000565511 TMEM150BA6NC51 233 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 C9IYK1 514 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 PSMD10O75832 226 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 MMP1P03956 469 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 CRYBB1P53674 252 aaPredicted RBP26.83■■□□□ 1.89
RAB40C-209ENST00000565511 SCRN1Q12765 414 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 DSC3Q14574 896 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 LRCH2Q5VUJ6 765 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 RIT2Q99578 217 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 LMAN2LQ9H0V9 348 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 ADAMTS10Q9H324 1103 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 GJB4Q9NTQ9 266 aa26.83■■□□□ 1.89
RAB40C-209ENST00000565511 CPLX1O14810 134 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 STAG3L1P0CL83 205 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 DLX2Q07687 328 aaPredicted RBP26.82■■□□□ 1.88
RAB40C-209ENST00000565511 Q4G0T1 1027 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 FAM102BQ5T8I3 360 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 B3GNT9Q6UX72 402 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 FAM178BQ8IXR5 827 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 ETNPPLQ8TBG4 499 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 MBOAT7Q96N66 472 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 PLVAPQ9BX97 442 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 TEKT3Q9BXF9 490 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 RGS18Q9NS28 235 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 CLDND1Q9NY35 253 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 PCDHGC5Q9Y5F6 944 aa26.82■■□□□ 1.88
RAB40C-209ENST00000565511 CYP3A7-CYP3A51PA0A087WV96 503 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 GRXCR2A6NFK2 248 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 LINC01565O15544 149 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 STBD1O95210 358 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 CYP3A7P24462 503 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 IRS1P35568 1242 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 EFCAB12Q6NXP0 572 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 EP400NLQ6ZTU2 488 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 KLHL23Q8NBE8 558 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 SPPL3Q8TCT6 385 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 FAM167AQ96KS9 214 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 LRFN2Q9ULH4 789 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 TPCN1Q9ULQ1 816 aa26.81■■□□□ 1.88
RAB40C-209ENST00000565511 SLC37A4O43826 429 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 DRP2Q13474 957 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 INF2Q27J81 1249 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 CTC1Q2NKJ3 1217 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 ADGRD2Q7Z7M1 963 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 P2RX5Q93086 422 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 CEP89Q96ST8 783 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 RNF19AQ9NV58 838 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 AKT3Q9Y243 479 aa26.8■■□□□ 1.88
RAB40C-209ENST00000565511 DENND3A2RUS2 1198 aa26.79■■□□□ 1.88
RAB40C-209ENST00000565511 FGFR1P11362 822 aa26.79■■□□□ 1.88
RAB40C-209ENST00000565511 JAK3P52333 1124 aa26.79■■□□□ 1.88
RAB40C-209ENST00000565511 NLRP11P59045 1033 aaKnown RBP26.79■■□□□ 1.88
RAB40C-209ENST00000565511 TARBP2Q15633 366 aaKnown RBP26.79■■□□□ 1.88
RAB40C-209ENST00000565511 SH2D3AQ9BRG2 576 aa26.79■■□□□ 1.88
RAB40C-209ENST00000565511 CEP131Q9UPN4 1083 aa26.79■■□□□ 1.88
RAB40C-209ENST00000565511 TBKBP1A7MCY6 615 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 GPR182O15218 404 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 MAGEB2O15479 319 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 TBX10O75333 385 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 CTDNEP1O95476 244 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 CLUL1Q15846 466 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 SLC24A5Q71RS6 500 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 MIER3Q7Z3K6 550 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 PHF20Q9BVI0 1012 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 C11orf16Q9NQ32 467 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 C1orf112Q9NSG2 853 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 PCDHB7Q9Y5E2 793 aa26.78■■□□□ 1.88
RAB40C-209ENST00000565511 FGFR4P22455 802 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 SFNP31947 248 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 GPC3P51654 580 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 FAM189BP81408 668 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 OXER1Q8TDS5 423 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 IGFLR1Q9H665 355 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 C5orf42Q9H799 3197 aa26.77■■□□□ 1.88
RAB40C-209ENST00000565511 EML1O00423 815 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 PFKFB2O60825 505 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 LARGE1O95461 756 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 NEFLP07196 543 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 NONOQ15233 471 aaKnown RBP eCLIP26.76■■□□□ 1.871e-6■■■■□ 24.9
RAB40C-209ENST00000565511 EARS2Q5JPH6 523 aaKnown RBP26.76■■□□□ 1.87
RAB40C-209ENST00000565511 POF1BQ8WVV4 589 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 MAP7D2Q96T17 732 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 C22orf23Q9BZE7 217 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 NRBP2Q9NSY0 501 aa26.76■■□□□ 1.87
RAB40C-209ENST00000565511 SEPT9Q9UHD8 586 aaPredicted RBP26.76■■□□□ 1.87
RAB40C-209ENST00000565511 STK36Q9NRP7 1315 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 FAM86C2PA6NEL3 165 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 FAM205CA6NFA0 338 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 MTERF2Q49AM1 385 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 MOXD1Q6UVY6 613 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 CWH43Q9H720 699 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 DDX25Q9UHL0 483 aaKnown RBP26.75■■□□□ 1.87
RAB40C-209ENST00000565511 VAV3Q9UKW4 847 aa26.75■■□□□ 1.87
RAB40C-209ENST00000565511 CSDE1O75534 798 aaKnown RBP26.74■■□□□ 1.87
RAB40C-209ENST00000565511 LETM2Q2VYF4 491 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 NAALADL2Q58DX5 795 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 GALNT17Q6IS24 598 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 CPLX2Q6PUV4 134 aaKnown RBP26.74■■□□□ 1.87
RAB40C-209ENST00000565511 KRT25Q7Z3Z0 450 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms