RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 SRPK3Q9UPE1 567 aa6.35□□□□□ -1.39
CHD9-214ENST00000565119 XDHP47989 1333 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 DDAH1O94760 285 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 CD38P28907 300 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 GPR85P60893 370 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 LRSAM1Q6UWE0 723 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 ZNF276Q8N554 614 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 RABGGTAQ92696 567 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 ZFYVE21Q9BQ24 234 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 GPR87Q9BY21 358 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 ACTR10Q9NZ32 417 aa6.34□□□□□ -1.39
CHD9-214ENST00000565119 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.34□□□□□ -1.39
CHD9-214ENST00000565119 VAMP1P23763 118 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 SETQ01105 290 aaPredicted RBP6.33□□□□□ -1.4
CHD9-214ENST00000565119 MOGSQ13724 837 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 ACAP1Q15027 740 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 OLFML1Q6UWY5 402 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD9-214ENST00000565119 MYH16Q9H6N6 1097 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
CHD9-214ENST00000565119 NR4A1P22736 598 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 ECE1P42892 770 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 RABL3Q5HYI8 236 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 EPHA10Q5JZY3 1008 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 STRIP1Q5VSL9 837 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 GSPT2Q8IYD1 628 aaKnown RBP6.32□□□□□ -1.4
CHD9-214ENST00000565119 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
CHD9-214ENST00000565119 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 SCAMP3O14828 347 aaKnown RBP6.31□□□□□ -1.4
CHD9-214ENST00000565119 KIAA0355O15063 1070 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 CDK4P11802 303 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 CLK3P49761 638 aaKnown RBP6.31□□□□□ -1.4
CHD9-214ENST00000565119 RABGGTBP53611 331 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
CHD9-214ENST00000565119 ARHGAP36Q6ZRI8 547 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 IFNL3Q8IZI9 196 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 OR10A5Q9H207 317 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 CTDP1Q9Y5B0 961 aaPredicted RBP6.31□□□□□ -1.4
CHD9-214ENST00000565119 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
CHD9-214ENST00000565119 KLRG2A4D1S0 409 aaPredicted RBP6.3□□□□□ -1.4
CHD9-214ENST00000565119 C4BPAP04003 597 aaKnown RBP6.3□□□□□ -1.4
CHD9-214ENST00000565119 ST5P78524 1137 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 ADAM15Q13444 863 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 PTPAQ15257 358 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 ELAVL1Q15717 326 aaKnown RBP6.3□□□□□ -1.4
CHD9-214ENST00000565119 LY6G5CQ5SRR4 150 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 HECTD2Q5U5R9 776 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 GRAMD4Q6IC98 578 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 STYK1Q6J9G0 422 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 EPN3Q9H201 632 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 TOR3AQ9H497 397 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 UCKL1Q9NWZ5 548 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 FZD1Q9UP38 647 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
CHD9-214ENST00000565119 BLACEA4D250 179 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 AGRPO00253 132 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 MAFGO15525 162 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 ABHD16AO95870 558 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 RECKO95980 971 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 AMY2AP04746 511 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 AMY2BP19961 511 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 ADCY7P51828 1080 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 IRX6P78412 446 aaPredicted RBP6.29□□□□□ -1.4
CHD9-214ENST00000565119 GPR19Q15760 415 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 GIMAP6Q6P9H5 292 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 EEPD1Q7L9B9 569 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 PTRH1Q86Y79 214 aaKnown RBP6.29□□□□□ -1.4
CHD9-214ENST00000565119 SYNE4Q8N205 404 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 THAP3Q8WTV1 239 aaPredicted RBP6.29□□□□□ -1.4
CHD9-214ENST00000565119 PRDM13Q9H4Q3 707 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 HS3ST4Q9Y661 456 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
CHD9-214ENST00000565119 ASXL2Q76L83 1435 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 TPD52L2O43399 206 aaKnown RBP6.28□□□□□ -1.4
CHD9-214ENST00000565119 ITGB1P05556 798 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 ZNF362Q5T0B9 420 aaPredicted RBP6.28□□□□□ -1.4
CHD9-214ENST00000565119 GORABQ5T7V8 394 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
CHD9-214ENST00000565119 BEND2Q8NDZ0 799 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 WDR48Q8TAF3 677 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 GPHA2Q96T91 129 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 R3HDMLQ9H3Y0 253 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 COX11Q9Y6N1 276 aa6.28□□□□□ -1.4
CHD9-214ENST00000565119 GRXCR1A8MXD5 290 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 PRODHO43272 600 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 HERVK_113P62684 666 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 NAALADL2Q58DX5 795 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 HSP90AB4PQ58FF6 505 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 FIGNQ5HY92 759 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 C1QL3Q5VWW1 255 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 FAM111BQ6SJ93 734 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 HTR3DQ70Z44 454 aa6.27□□□□□ -1.41
CHD9-214ENST00000565119 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
CHD9-214ENST00000565119 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms