RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MMP1P03956 469 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 MCM2P49736 904 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 NLRP11P59045 1033 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 PAN2Q504Q3 1202 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 PLA2G4FQ68DD2 849 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 FIBCD1Q8N539 461 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 RDM1Q8NG50 284 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 LLPHQ9BRT6 129 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 THEGQ9P2T0 379 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
VPS9D1-204ENST00000565023 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 CHD9Q3L8U1 2897 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 TCF20Q9UGU0 1960 aaKnown RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 TMOD1P28289 359 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 CTNNB1P35222 781 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 GATMP50440 423 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 BTG3Q14201 252 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 EPC2Q52LR7 807 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 XKR3Q5GH77 459 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 B3GNT9Q6UX72 402 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 HAS1Q92839 578 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 FTHL17Q9BXU8 183 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 ERVK-5Q9HDB9 667 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 LRFN2Q9ULH4 789 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 ST3GAL5Q9UNP4 418 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 KIAA1671Q9BY89 1806 aa15.31■□□□□ 0.04
VPS9D1-204ENST00000565023 BDP1A6H8Y1 2624 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 DENND3A2RUS2 1198 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 WNT7AO00755 349 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 MGEA5O60502 916 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 CRYBB1P53674 252 aaPredicted RBP15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 PSMC5P62195 406 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 DRP2Q13474 957 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 GPM6BQ13491 265 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 ADGRA3Q8IWK6 1321 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 FAM184AQ8NB25 1140 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 TNFRSF25Q93038 417 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 C8orf76Q96K31 380 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 ADAM2Q99965 735 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 RAPGEFL1Q9UHV5 662 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
VPS9D1-204ENST00000565023 GPR182O15218 404 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 GPR32O75388 356 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 STAG3L1P0CL83 205 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 FGFR4P22455 802 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 PLA2G5P39877 138 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 CYP4A11Q02928 519 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 TFF2Q03403 129 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 PPP2R5CQ13362 524 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 GNL2Q13823 731 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 CALCRLQ16602 461 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 LINC01465Q8N7H1 131 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 NLRP7Q8WX94 980 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 DYDC2Q96IM9 177 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
VPS9D1-204ENST00000565023 CHD7Q9P2D1 2997 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 CSDE1O75534 798 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 STBD1O95210 358 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 QARSP47897 775 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 GPC3P51654 580 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 NPEPPSP55786 919 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 HMGN5P82970 282 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 TARBP2Q15633 366 aaKnown RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 ODR4Q5SWX8 454 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 ANO5Q75V66 913 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 SAMD11Q96NU1 681 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 LXNQ9BS40 222 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 ARID2Q68CP9 1835 aa15.28■□□□□ 0.04
VPS9D1-204ENST00000565023 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 TBX3O15119 743 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 NEMFO60524 1076 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 DGKIO75912 1065 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 P4HBP07237 508 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 POU3F3P20264 500 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 MCM7P33993 719 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 TXKP42681 527 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 EPHA7Q15375 998 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 TJAP1Q5JTD0 557 aa15.27■□□□□ 0.04
VPS9D1-204ENST00000565023 RHPN2Q8IUC4 686 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms