RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DBR1Q9UK59 544 aaKnown RBP17.82■□□□□ 0.44
RAB40C-208ENST00000564703 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
RAB40C-208ENST00000564703 TRPV2Q9Y5S1 764 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 CDY2AQ9Y6F7 541 aa17.82■□□□□ 0.44
RAB40C-208ENST00000564703 KDM3AQ9Y4C1 1321 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 ARHGEF35A5YM69 484 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 PP2D1A8MPX8 630 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SPTLC2O15270 562 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SLC26A4O43511 780 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 GAS2O43903 313 aaKnown RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 DGAT1O75907 488 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 YEATS4O95619 227 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 CHRNA1P02708 482 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 NCLP19338 710 aaKnown RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 NASPP49321 788 aaPredicted RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SHHQ15465 462 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 ODR4Q5SWX8 454 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 POTEGQ6S5H5 508 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 CABP7Q86V35 215 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 TDHQ8IZJ6 230 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 KRI1Q8N9T8 703 aaKnown RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 ZNF579Q8NAF0 562 aaKnown RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 LINC00301Q8NCQ3 95 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SEPT8Q92599 483 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SCLT1Q96NL6 688 aa17.81■□□□□ 0.44
RAB40C-208ENST00000564703 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 SUCLA2Q9P2R7 463 aaPredicted RBP17.81■□□□□ 0.44
RAB40C-208ENST00000564703 NBNO60934 754 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 VTNP04004 478 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 TXLNAP40222 546 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 RARRES1P49788 294 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 EPHB4P54760 987 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 NLRP11P59045 1033 aaKnown RBP17.8■□□□□ 0.44
RAB40C-208ENST00000564703 IKBKEQ14164 716 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 TMEM240Q5SV17 173 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 C16orf59Q7L2K0 433 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 OTOP2Q7RTS6 562 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
RAB40C-208ENST00000564703 CEP89Q96ST8 783 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 MTRQ99707 1265 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 CSRNP2Q9H175 543 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 DHX33Q9H6R0 707 aaKnown RBP17.8■□□□□ 0.44
RAB40C-208ENST00000564703 CCDC39Q9UFE4 941 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 SQORQ9Y6N5 450 aa17.8■□□□□ 0.44
RAB40C-208ENST00000564703 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 IGKV6-21A0A0C4DH24 114 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 ZBBXA8MT70 800 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 ASAP2O43150 1006 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 PPP6R2O75170 966 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 CXCL10P02778 98 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 CRYBB1P53674 252 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 DNM1Q05193 864 aaKnown RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 CNKSR3Q6P9H4 555 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 MMTAG2Q9BU76 263 aaKnown RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 ATP6V0A4Q9HBG4 840 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 FBXO2Q9UK22 296 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 ZDHHC9Q9Y397 364 aa17.79■□□□□ 0.44
RAB40C-208ENST00000564703 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-208ENST00000564703 EFCAB14O75071 495 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 EYA4O95677 639 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 GHRP10912 638 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 KRT85P78386 507 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 MGAT3Q09327 533 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 EMC2Q15006 297 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 ECM1Q16610 540 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 KIZQ2M2Z5 673 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 C9orf50Q5SZB4 431 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 RHPN2Q8IUC4 686 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 DBF4BQ8NFT6 615 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 NLRP7Q8WX94 980 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 HERVK_113Q902F9 699 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 APBB2Q92870 758 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 TMEM143Q96AN5 459 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 PLIN2Q99541 437 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
RAB40C-208ENST00000564703 INO80BQ9C086 356 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-208ENST00000564703 CCSER1Q9C0I3 900 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 BHMT2Q9H2M3 363 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 PRO3102Q9H379 93 aa17.78■□□□□ 0.44
RAB40C-208ENST00000564703 BMP2KQ9NSY1 1161 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-208ENST00000564703 ABHD14A-ACY1A0A1B0GW23 586 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 E9PMD0 336 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 GPR182O15218 404 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 USO1O60763 962 aaKnown RBP17.77■□□□□ 0.44
RAB40C-208ENST00000564703 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.44
RAB40C-208ENST00000564703 ME1P48163 572 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 GRIN1Q05586 938 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 MXD4Q14582 209 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-208ENST00000564703 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 GPNMBQ14956 572 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 SPECC1Q5M775 1068 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 FBXO47Q5MNV8 452 aa17.77■□□□□ 0.44
RAB40C-208ENST00000564703 HYIQ5T013 277 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms