RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 STBD1O95210 358 aa20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 TXKP42681 527 aa20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 HTRA4P83105 476 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 TMEM266Q2M3C6 531 aa20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 OSMRQ99650 979 aa20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 TTC12Q9H892 705 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-204ENST00000564642 TMEM150BA6NC51 233 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 WNT7AO00755 349 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 GPR182O15218 404 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 GPR32O75388 356 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 CD2BP2O95400 341 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 MCM7P33993 719 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 DNM2P50570 870 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 NLRP11P59045 1033 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 LINC01465Q8N7H1 131 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 TGS1Q96RS0 853 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 SH2D3AQ9BRG2 576 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 RAPGEFL1Q9UHV5 662 aa20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 NOC2LQ9Y3T9 749 aaKnown RBP20.57■□□□□ 0.88
SYNGR3-204ENST00000564642 LINC01553A4QN01 128 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 RFXAPO00287 272 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 SPIRE1Q08AE8 756 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 ADGRE1Q14246 886 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 FAM43BQ6ZT52 329 aaPredicted RBP20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 ANO5Q75V66 913 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 OTUD6AQ7L8S5 288 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 NOSTRINQ8IVI9 506 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 C4orf19Q8IY42 314 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 TMEM40Q8WWA1 233 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 DYDC2Q96IM9 177 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 SCLT1Q96NL6 688 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 MTMR9Q96QG7 549 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 JPH2Q9BR39 696 aaPredicted RBP20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 LXNQ9BS40 222 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 BACH2Q9BYV9 841 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 ZSWIM4Q9H7M6 989 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 ERVK-5Q9HDB9 667 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 RGL1Q9NZL6 768 aa20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 NOL7Q9UMY1 257 aaKnown RBP20.56■□□□□ 0.88
SYNGR3-204ENST00000564642 CDC42EP1Q00587 391 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 CYP4A11Q02928 519 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 CTTNQ14247 550 aaKnown RBP20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 ZNF174Q15697 407 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 PLA2G4FQ68DD2 849 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 RTN4RL1Q86UN2 441 aaPredicted RBP20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 TPH2Q8IWU9 490 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 EXOC8Q8IYI6 725 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 SP7Q8TDD2 431 aaPredicted RBP20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 PPM1EQ8WY54 764 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 CEP170P1Q96L14 293 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 CEP89Q96ST8 783 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 CYP26B1Q9NR63 512 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 MTUS1Q9ULD2 1270 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 ST3GAL5Q9UNP4 418 aa20.55■□□□□ 0.88
SYNGR3-204ENST00000564642 TTC3P53804 2025 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 DENND3A2RUS2 1198 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 EPOPA6NHQ4 379 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 GTPBP6O43824 516 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 MAFO75444 373 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 STAG3L1P0CL83 205 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 ERVK-21P61565 698 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 ORC2Q13416 577 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 TTC38Q5R3I4 469 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 NLRP7Q8WX94 980 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 LINC01599Q8WXQ3 324 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 EIF2AK1Q9BQI3 630 aaKnown RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 TSPYL2Q9H2G4 693 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 TMEM60Q9H2L4 133 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 ADAMTS10Q9H324 1103 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 TMX1Q9H3N1 280 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 WRAP73Q9P2S5 460 aaPredicted RBP20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
SYNGR3-204ENST00000564642 IGKV6-21A0A0C4DH24 114 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 EIF4BP23588 611 aaKnown RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 GJB2P29033 226 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 YWHABP31946 246 aaKnown RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 TRAPPC10P48553 1259 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 GPC3P51654 580 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 NPEPPSP55786 919 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 CCDC85BQ15834 202 aaPredicted RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 SPRED2Q7Z698 418 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 FAM228AQ86W67 206 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 NEK9Q8TD19 979 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 SLC7A3Q8WY07 619 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 ZNF668Q96K58 619 aaPredicted RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 LRFN2Q9ULH4 789 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 SMC3Q9UQE7 1217 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 PPME1Q9Y570 386 aa20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.53■□□□□ 0.88
SYNGR3-204ENST00000564642 SLITRK3O94933 977 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 POLGP54098 1239 aaPredicted RBP20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 DRP2Q13474 957 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 MCTP1Q6DN14 999 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 NPAS4Q8IUM7 802 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 FIBCD1Q8N539 461 aa20.52■□□□□ 0.88
SYNGR3-204ENST00000564642 SAMD11Q96NU1 681 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms