RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
CHD9-212ENST00000564641 TM4SF20Q53R12 229 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 CATSPEREQ5SY80 951 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 Q6ZSN1 163 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 SCAND2PQ9GZW5 306 aaPredicted RBP6.48□□□□□ -1.37
CHD9-212ENST00000564641 OSBPL2Q9H1P3 480 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 PLA2G3Q9NZ20 509 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
CHD9-212ENST00000564641 SLC26A4O43511 780 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
CHD9-212ENST00000564641 ZBTB48P10074 688 aaPredicted RBP6.47□□□□□ -1.37
CHD9-212ENST00000564641 ROM1Q03395 351 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 HGFACQ04756 655 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 ZCCHC8Q6NZY4 707 aaKnown RBP6.47□□□□□ -1.37
CHD9-212ENST00000564641 ABHD17CQ6PCB6 329 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 FGD2Q7Z6J4 655 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 NME9Q86XW9 330 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 GFM2Q969S9 779 aaKnown RBP6.47□□□□□ -1.37
CHD9-212ENST00000564641 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 ACSS2Q9NR19 701 aa6.47□□□□□ -1.37
CHD9-212ENST00000564641 CYP27B1O15528 508 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 ASLP04424 464 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 CYP17A1P05093 508 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 ACRV1P26436 265 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 FLT3P36888 993 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 MECP2P51608 486 aaKnown RBP6.46□□□□□ -1.38
CHD9-212ENST00000564641 GRM7Q14831 915 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 FSTL4Q6MZW2 842 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 KLHDC10Q6PID8 442 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 RTN4RL1Q86UN2 441 aaPredicted RBP6.46□□□□□ -1.38
CHD9-212ENST00000564641 LILRB2Q8N423 598 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 FOXRED1Q96CU9 486 aaPredicted RBP6.46□□□□□ -1.38
CHD9-212ENST00000564641 MRIQ9BWK5 157 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 CABP5Q9NP86 173 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 SAMD15Q9P1V8 674 aa6.46□□□□□ -1.38
CHD9-212ENST00000564641 SAE1Q9UBE0 346 aaPredicted RBP6.46□□□□□ -1.38
CHD9-212ENST00000564641 MSX2P35548 267 aaPredicted RBP6.45□□□□□ -1.38
CHD9-212ENST00000564641 STAT5BP51692 787 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 FOXL1Q12952 345 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 C1orf210Q8IVY1 113 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 CHST14Q8NCH0 376 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 SHCBP1Q8NEM2 672 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 OR14K1Q8NGZ2 314 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 RABGGTAQ92696 567 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 ERCC4Q92889 916 aaPredicted RBP6.45□□□□□ -1.38
CHD9-212ENST00000564641 MPHOSPH9Q99550 1183 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 PCED1AQ9H1Q7 454 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 CDK11AQ9UQ88 783 aaPredicted RBP6.45□□□□□ -1.38
CHD9-212ENST00000564641 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
CHD9-212ENST00000564641 HS3ST3A1Q9Y663 406 aa6.45□□□□□ -1.38
CHD9-212ENST00000564641 MAFGO15525 162 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 SUV39H1O43463 412 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 SLPIP03973 132 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
CHD9-212ENST00000564641 RANGAP1P46060 587 aaPredicted RBP6.44□□□□□ -1.38
CHD9-212ENST00000564641 KIF11P52732 1056 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 PTH1RQ03431 593 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 ZNF174Q15697 407 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 THEMISQ8N1K5 641 aaPredicted RBP6.44□□□□□ -1.38
CHD9-212ENST00000564641 SREK1Q8WXA9 508 aaKnown RBP6.44□□□□□ -1.38
CHD9-212ENST00000564641 EXTL1Q92935 676 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 CSRNP2Q9H175 543 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 PCIF1Q9H4Z3 704 aa6.44□□□□□ -1.38
CHD9-212ENST00000564641 H7C1D1 291 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 M0R2C6 588 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 RAPGEF3O95398 923 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 PRLP01236 227 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 MCM7P33993 719 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 ABHD18Q0P651 414 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 DGKDQ16760 1214 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 UBE2R2Q712K3 238 aaPredicted RBP6.43□□□□□ -1.38
CHD9-212ENST00000564641 SGMS1Q86VZ5 419 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 SLC7A6OSQ96CW6 309 aaPredicted RBP6.43□□□□□ -1.38
CHD9-212ENST00000564641 MRFAP1L1Q96HT8 127 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 MAML3Q96JK9 1138 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 SLC6A15Q9H2J7 730 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 ZNF703Q9H7S9 590 aaPredicted RBP6.43□□□□□ -1.38
CHD9-212ENST00000564641 TLR9Q9NR96 1032 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 KCMF1Q9P0J7 381 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
CHD9-212ENST00000564641 UBA6A0AVT1 1052 aaPredicted RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 NPIPB8E9PQR5 432 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 OPA1O60313 960 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 GLRX3O76003 335 aaKnown RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 PURAQ00577 322 aaKnown RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 SLC6A3Q01959 620 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 ADAM15Q13444 863 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 TTC38Q5R3I4 469 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 SLFN12LQ6IEE8 588 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 BCL6BQ8N143 479 aaPredicted RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 ANKRD35Q8N283 1001 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 D2HGDHQ8N465 521 aa6.42□□□□□ -1.38
CHD9-212ENST00000564641 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 GCDHQ92947 438 aaPredicted RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 DNAJC2Q99543 621 aaKnown RBP6.42□□□□□ -1.38
CHD9-212ENST00000564641 DENND2AQ9ULE3 1009 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms