RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ATF7P17544 494 aaPredicted RBP16■□□□□ 0.15
CDR2-204ENST00000564542 LAG3P18627 525 aa16■□□□□ 0.15
CDR2-204ENST00000564542 CDC27P30260 824 aa16■□□□□ 0.15
CDR2-204ENST00000564542 PFKFB3Q16875 520 aaPredicted RBP16■□□□□ 0.15
CDR2-204ENST00000564542 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
CDR2-204ENST00000564542 JAKMIP3Q5VZ66 844 aa16■□□□□ 0.15
CDR2-204ENST00000564542 ZNF746Q6NUN9 644 aaPredicted RBP16■□□□□ 0.15
CDR2-204ENST00000564542 CKAP2LQ8IYA6 745 aa16■□□□□ 0.15
CDR2-204ENST00000564542 SMAP1Q8IYB5 467 aaPredicted RBP16■□□□□ 0.15
CDR2-204ENST00000564542 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
CDR2-204ENST00000564542 PPP1R16BQ96T49 567 aa16■□□□□ 0.15
CDR2-204ENST00000564542 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
CDR2-204ENST00000564542 ATP6V0A4Q9HBG4 840 aa16■□□□□ 0.15
CDR2-204ENST00000564542 FAM217BQ9NTX9 383 aaPredicted RBP16■□□□□ 0.15
CDR2-204ENST00000564542 TBC1D22BQ9NU19 505 aa16■□□□□ 0.15
CDR2-204ENST00000564542 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
CDR2-204ENST00000564542 HCSTQ9UBK5 93 aa16■□□□□ 0.15
CDR2-204ENST00000564542 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
CDR2-204ENST00000564542 LZTS1Q9Y250 596 aa16■□□□□ 0.15
CDR2-204ENST00000564542 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
CDR2-204ENST00000564542 ESYT2A0FGR8 921 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 TMEM221A6NGB7 291 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 M0R296 226 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 GPR32O75388 356 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 VTNP04004 478 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 SRGAP2BP0DMP2 458 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 FGFR1P11362 822 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 ERVFC1P60507 584 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 FAM189BP81408 668 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 ZXDAP98168 799 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 RBM10P98175 930 aaKnown RBP15.99■□□□□ 0.15
CDR2-204ENST00000564542 DSC3Q14574 896 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 PKN1Q16512 942 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 BMP2KLQ5H9B9 411 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 SUSD6Q92537 303 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 CWH43Q9H720 699 aa15.99■□□□□ 0.15
CDR2-204ENST00000564542 HOXA2O43364 376 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 PSAPP07602 524 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 PLCB3Q01970 1234 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 KCNC3Q14003 757 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 KRT32Q14532 448 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 ADCK5Q3MIX3 580 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 TMEM184AQ6ZMB5 413 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 KMT2EQ8IZD2 1858 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
CDR2-204ENST00000564542 RASGRP4Q8TDF6 673 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 CCDC12Q8WUD4 166 aaPredicted RBP15.98■□□□□ 0.15
CDR2-204ENST00000564542 MRPS27Q92552 414 aaKnown RBP15.98■□□□□ 0.15
CDR2-204ENST00000564542 PBXIP1Q96AQ6 731 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 ZMYND12Q9H0C1 365 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 TCEAL9Q9UHQ7 104 aa15.98■□□□□ 0.15
CDR2-204ENST00000564542 CCDC196A0A1B0GTZ2 297 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 MAGEB2O15479 319 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 HMGB1P09429 215 aaKnown RBP15.97■□□□□ 0.15
CDR2-204ENST00000564542 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDR2-204ENST00000564542 PLPP4Q5VZY2 271 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 SUGP1Q8IWZ8 645 aaKnown RBP15.97■□□□□ 0.15
CDR2-204ENST00000564542 ZNF710Q8N1W2 664 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 LRRC43Q8N309 656 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 PRSS33Q8NF86 280 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 RPGRIP1Q96KN7 1286 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 FAM167AQ96KS9 214 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 MAP7D2Q96T17 732 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 PRRX2Q99811 253 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 TCF25Q9BQ70 676 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 C6orf50Q9HD87 102 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 PCDHA10Q9Y5I2 948 aa15.97■□□□□ 0.15
CDR2-204ENST00000564542 WDR81Q562E7 1941 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.15
CDR2-204ENST00000564542 PPM1AP35813 382 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 CLCN3P51790 818 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 SIGLEC14Q08ET2 396 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 ANKRD54Q6NXT1 300 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 LRRC55Q6ZSA7 311 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 TRMT1LQ7Z2T5 733 aaKnown RBP15.96■□□□□ 0.15
CDR2-204ENST00000564542 LINC01465Q8N7H1 131 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 CASD1Q96PB1 797 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
CDR2-204ENST00000564542 ENTPD7Q9NQZ7 604 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 RNF19AQ9NV58 838 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 GABBR1Q9UBS5 961 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 PUF60Q9UHX1 559 aaKnown RBP15.96■□□□□ 0.15
CDR2-204ENST00000564542 NAP1L2Q9ULW6 460 aaPredicted RBP15.96■□□□□ 0.15
CDR2-204ENST00000564542 AKT3Q9Y243 479 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 NID2Q14112 1375 aa15.96■□□□□ 0.15
CDR2-204ENST00000564542 WDR64B1ANS9 1081 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 ADAMTS3O15072 1205 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
CDR2-204ENST00000564542 EIF4BP23588 611 aaKnown RBP15.95■□□□□ 0.14
CDR2-204ENST00000564542 TMOD1P28289 359 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 GNA11P29992 359 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 CIITAP33076 1130 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 TECP42680 631 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 PTPN5P54829 565 aa15.95■□□□□ 0.14
CDR2-204ENST00000564542 NLRP11P59045 1033 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms