RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 TOMM70O94826 608 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 FARP2O94887 1054 aaPredicted RBP19.49■□□□□ 0.71
GDE1-203ENST00000564172 ATG7O95352 703 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 GRB14Q14449 540 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 CEP135Q66GS9 1140 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 MIS18BP1Q6P0N0 1132 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 KCNV1Q6PIU1 500 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 PLEKHH3Q7Z736 793 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 CCDC60Q8IWA6 550 aaPredicted RBP19.49■□□□□ 0.71
GDE1-203ENST00000564172 SEMA6BQ9H3T3 888 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 COL4A3BPQ9Y5P4 624 aa19.49■□□□□ 0.71
GDE1-203ENST00000564172 BICDL2A1A5D9 508 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 ZNF862O60290 1169 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
GDE1-203ENST00000564172 ARIH2O95376 493 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 LY6KQ17RY6 165 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 ANKRD40Q6AI12 368 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 PADI6Q6TGC4 694 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 ARMCX2Q7L311 632 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 TRMT1LQ7Z2T5 733 aaKnown RBP19.48■□□□□ 0.71
GDE1-203ENST00000564172 SFR1Q86XK3 245 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
GDE1-203ENST00000564172 DRC7Q8IY82 874 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 MYOCDQ8IZQ8 938 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 ATP6V0A1Q93050 837 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 HHIPL1Q96JK4 782 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 DUSP9Q99956 384 aaKnown RBP19.48■□□□□ 0.71
GDE1-203ENST00000564172 SYNGAP1Q96PV0 1343 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 KLHL33A6NCF5 533 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 SFI1A8K8P3 1242 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 DKC1O60832 514 aaKnown RBP eCLIP19.48■□□□□ 0.71
GDE1-203ENST00000564172 SUPT20HL2P0C7V6 817 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 EXOC4Q96A65 974 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 TRIM47Q96LD4 638 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 ANKEF1Q9NU02 776 aa19.48■□□□□ 0.71
GDE1-203ENST00000564172 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 TMEM150BA6NC51 233 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 TLR2O60603 784 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 SLU7O95391 586 aaKnown RBP19.47■□□□□ 0.71
GDE1-203ENST00000564172 GGPS1O95749 300 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 ANO5Q75V66 913 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 ZNF467Q7Z7K2 595 aaPredicted RBP19.47■□□□□ 0.71
GDE1-203ENST00000564172 DPP9Q86TI2 863 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 SH2D3AQ9BRG2 576 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 ODF2LQ9ULJ1 636 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 DOCK5Q9H7D0 1870 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 FAM13AO94988 1023 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 GAP43P17677 238 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 C17orf99Q6UX52 265 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 METTL7BQ6UX53 244 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 APTXQ7Z2E3 356 aaKnown RBP19.47■□□□□ 0.71
GDE1-203ENST00000564172 ZIC5Q96T25 663 aa19.47■□□□□ 0.71
GDE1-203ENST00000564172 SRRTQ9BXP5 876 aaKnown RBP19.47■□□□□ 0.71
GDE1-203ENST00000564172 BACH1O14867 736 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 CBFA2T2O43439 604 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 STBD1O95210 358 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 ZRANB2O95218 330 aaKnown RBP eCLIP19.46■□□□□ 0.71
GDE1-203ENST00000564172 ZNF131P52739 623 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 ELF2Q15723 593 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 IRF2BP1Q8IU81 584 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 CSGALNACT2Q8N6G5 542 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 SCFD1Q8WVM8 642 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 PARVGQ9HBI0 331 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 OLFML3Q9NRN5 406 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 DIS3Q9Y2L1 958 aaKnown RBP19.46■□□□□ 0.71
GDE1-203ENST00000564172 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
GDE1-203ENST00000564172 GSTTP1A0A1W2PQM5 241 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 KIF2AO00139 706 aaPredicted RBP19.45■□□□□ 0.7
GDE1-203ENST00000564172 TM4SF4P48230 202 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 NPEPPSP55786 919 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 XKR9Q5GH70 373 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 MYCT1Q8N699 235 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 CCDC43Q96MW1 224 aaKnown RBP19.45■□□□□ 0.7
GDE1-203ENST00000564172 MLXIPQ9HAP2 919 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 PDGFCQ9NRA1 345 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 IGKV6D-21A0A0A0MT36 114 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 SLC15A5A6NIM6 579 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 RPS6KA5O75582 802 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 CASP5P51878 434 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 MAPK7Q13164 816 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 PLA2G4FQ68DD2 849 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 MAMDC4Q6UXC1 1216 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 DAW1Q8N136 415 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 THAP9Q9H5L6 903 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 ZFYVE28Q9HCC9 887 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 MAFBQ9Y5Q3 323 aaPredicted RBP19.45■□□□□ 0.7
GDE1-203ENST00000564172 IGSF9BQ9UPX0 1349 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 MCM3APO60318 1980 aa19.45■□□□□ 0.7
GDE1-203ENST00000564172 LRRC10BA6NIK2 292 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 HIP1RO75146 1068 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 ACTN2P35609 894 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 LRRC63Q05C16 580 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 SPAG1Q07617 926 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 CELF3Q5SZQ8 465 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 FOXR2Q6PJQ5 311 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms