RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	PLCL1	Q15111	1095 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CEP68	Q76N32	757 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	SLCO6A1	Q86UG4	719 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	OXR1	Q8N573	874 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ANKS4B	Q8N8V4	417 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PCDH19	Q8TAB3	1148 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	LEO1	Q8WVC0	666 aa	Predicted RBP	7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DPF3	Q92784	378 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.68	□□□□□ -1.18	2e-6	■■□□□ 11.7
HERPUD1-208	ENST00000563911	CLDND1	Q9NY35	253 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ADAMTSL1	Q8N6G6	1762 aa		7.68	□□□□□ -1.18
HERPUD1-208	ENST00000563911	WTIP	A6NIX2	430 aa	Predicted RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RASSF10	A6NK89	507 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FAM47E-STBD1	D6RA91	191 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ARVCF	O00192	962 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	KPNA6	O60684	536 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	WNT11	O96014	354 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	IL13	P35225	146 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CHRNE	Q04844	493 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	HSF5	Q4G112	596 aa	Predicted RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PIK3R6	Q5UE93	754 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	SULT6B1	Q6IMI4	303 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	NFXL1	Q6ZNB6	911 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RNF180	Q86T96	592 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DDX53	Q86TM3	631 aa	Known RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PDZD8	Q8NEN9	1154 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	USP33	Q8TEY7	942 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	TMEM169	Q96HH4	297 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	WNK4	Q96J92	1243 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	IPPK	Q9H8X2	491 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	MARCH2	Q9P0N8	246 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	SAMD15	Q9P1V8	674 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FBXL7	Q9UJT9	491 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RWDD3	Q9Y3V2	267 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	TAF6L	Q9Y6J9	622 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DICER1	Q9UPY3	1922 aa	Known RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	WDR33	Q9C0J8	1336 aa	Known RBP	7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	COL4A5	P29400	1685 aa		7.67	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RNMT	O43148	476 aa	Known RBP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PPP1R11	O60927	126 aa	Predicted RBP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FUCA1	P04066	466 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	SRGN	P10124	158 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	POU3F2	P20265	443 aa	Predicted RBP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	GRK2	P25098	689 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	GRK3	P35626	688 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ST5	P78524	1137 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	NFKB2	Q00653	900 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	AMOT	Q4VCS5	1084 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CST9	Q5W186	159 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	GALNT18	Q6P9A2	607 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ABHD17C	Q6PCB6	329 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DDX46	Q7L014	1031 aa	Known RBP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	LDHD	Q86WU2	507 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	IGSF22	Q8N9C0	903 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	TRMT2B	Q96GJ1	504 aa	Known RBP	7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	KCNJ15	Q99712	375 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	BRIP1	Q9BX63	1249 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	IMPACT	Q9P2X3	320 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	COQ6	Q9Y2Z9	468 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	SCN11A	Q9UI33	1791 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CACNA1S	Q13698	1873 aa		7.66	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FITM1	A5D6W6	292 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	GSTA4	O15217	222 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	KCNQ3	O43525	872 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ADAM23	O75077	832 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DNM2	P50570	870 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RBM10	P98175	930 aa	Known RBP	7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	LTBP1	Q14766	1721 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	DEFB115	Q30KQ5	88 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FAM47C	Q5HY64	1035 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	TEX2	Q8IWB9	1127 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	CNTROB	Q8N137	903 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	AGBL5	Q8NDL9	886 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	FBXW5	Q969U6	566 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ASIC4	Q96FT7	647 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	JAM3	Q9BX67	310 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	TAOK3	Q9H2K8	898 aa		7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.65	□□□□□ -1.18
HERPUD1-208	ENST00000563911	RNF123	Q5XPI4	1314 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911		A0A1W2PQJ5	194 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	C22orf46	C9J442	243 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911		H7BY64	318 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	NRDC	O43847	1150 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ADAMTS4	O75173	837 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CAMTA2	O94983	1202 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	A1BG	P04217	495 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	PRKCA	P17252	672 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	FPR2	P25090	351 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	PIP4K2A	P48426	406 aa	Predicted RBP	7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ERVFC1	P60507	584 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	MTHFSD	Q2M296	383 aa	Known RBP	7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CYP4F22	Q6NT55	531 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	PKN3	Q6P5Z2	889 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	NLRP10	Q86W26	655 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	LZTR1	Q8N653	840 aa		7.64	□□□□□ -1.19
HERPUD1-208	ENST00000563911	NUP43	Q8NFH3	380 aa		7.64	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms