RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TRAPPC12Q8WVT3 735 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 GINS2Q9Y248 185 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 NOC2LQ9Y3T9 749 aaKnown RBP18.24■□□□□ 0.51
RNF40-205ENST00000563909 PCDHA2Q9Y5H9 948 aa18.24■□□□□ 0.51
RNF40-205ENST00000563909 KDM3AQ9Y4C1 1321 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 KRBA1A5PL33 1030 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 NARSO43776 548 aaKnown RBP18.23■□□□□ 0.51
RNF40-205ENST00000563909 ATP9AO75110 1047 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 CFHP08603 1231 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 TMC5Q6UXY8 1006 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 NLRX1Q86UT6 975 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 NME8Q8N427 588 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 CHAMP1Q96JM3 812 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 TMEM161AQ9NX61 479 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 WNT16Q9UBV4 365 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 LOXHD1Q8IVV2 1947 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 GPR179Q6PRD1 2367 aa18.23■□□□□ 0.51
RNF40-205ENST00000563909 CXCL14O95715 111 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 EPCAMP16422 314 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 NT5C2P49902 561 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 FAM43BQ6ZT52 329 aaPredicted RBP18.22■□□□□ 0.51
RNF40-205ENST00000563909 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 FEZF2Q8TBJ5 459 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 PIGSQ96S52 555 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 TMEM117Q9H0C3 514 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 NCDNQ9UBB6 729 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 RALYQ9UKM9 306 aaKnown RBP18.22■□□□□ 0.51
RNF40-205ENST00000563909 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
RNF40-205ENST00000563909 CDC45O75419 566 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 DCNP07585 359 aaKnown RBP18.21■□□□□ 0.51
RNF40-205ENST00000563909 FAM189BP81408 668 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 CCDC149Q6ZUS6 474 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 CASD1Q96PB1 797 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 TBC1D17Q9HA65 648 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 CDHR5Q9HBB8 845 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 PKD2L1Q9P0L9 805 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 CA14Q9ULX7 337 aa18.21■□□□□ 0.51
RNF40-205ENST00000563909 SMIM35A0A1B0GVV1 85 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 DCDC2BA2VCK2 349 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 B4E1Z4 1266 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 KINO60870 393 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 KCNA2P16389 499 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 VARS2Q5ST30 1063 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 CABP7Q86V35 215 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 TNPO1Q92973 898 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 ELAC1Q9H777 363 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 IGSF9Q9P2J2 1179 aa18.2■□□□□ 0.5
RNF40-205ENST00000563909 CDV3Q9UKY7 258 aaKnown RBP18.2■□□□□ 0.5
RNF40-205ENST00000563909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
RNF40-205ENST00000563909 GPR182O15218 404 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 COL9A2Q14055 689 aaPredicted RBP18.19■□□□□ 0.5
RNF40-205ENST00000563909 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 SLC35G1Q2M3R5 365 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 SLC39A11Q8N1S5 342 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 LRRC43Q8N309 656 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 TMEM40Q8WWA1 233 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 PCYT2Q99447 389 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 AZI2Q9H6S1 392 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 SIT1Q9Y3P8 196 aa18.19■□□□□ 0.5
RNF40-205ENST00000563909 PALM3A6NDB9 673 aaPredicted RBP18.18■□□□□ 0.5
RNF40-205ENST00000563909 SGSM2O43147 1006 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 HOXA2O43364 376 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 IFIT1BQ5T764 474 aaKnown RBP18.18■□□□□ 0.5
RNF40-205ENST00000563909 MTHFD1LQ6UB35 978 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 ABI1Q8IZP0 508 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 GPR161Q8N6U8 529 aaKnown RBP18.18■□□□□ 0.5
RNF40-205ENST00000563909 SLC22A17Q8WUG5 538 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 RSAD2Q8WXG1 361 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 AUTS2Q8WXX7 1259 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 GPRASP2Q96D09 838 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 DLGAP2Q9P1A6 1054 aa18.18■□□□□ 0.5
RNF40-205ENST00000563909 ANKRD11Q6UB99 2663 aaPredicted RBP18.18■□□□□ 0.5
RNF40-205ENST00000563909 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 PRR5-ARHGAP8B1AHC4 643 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 ADRB1P08588 477 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 ARHGAP8P85298 464 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 USP17L6PQ6QN14 398 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 SMARCC2Q8TAQ2 1214 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 UBAC1Q9BSL1 405 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 RNF19AQ9NV58 838 aa18.17■□□□□ 0.5
RNF40-205ENST00000563909 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 ITGB5P18084 799 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 KLRC1P26715 233 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 LMNB2Q03252 620 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.5
RNF40-205ENST00000563909 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 VPS52Q8N1B4 723 aa18.16■□□□□ 0.5
RNF40-205ENST00000563909 ESYT1Q9BSJ8 1104 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms