RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 PRKAG3Q9UGI9 489 aa17.82■□□□□ 0.44
CLK3-211ENST00000563297 TCEAL9Q9UHQ7 104 aa17.82■□□□□ 0.44
CLK3-211ENST00000563297 SAMM50Q9Y512 469 aa17.82■□□□□ 0.44
CLK3-211ENST00000563297 WDR64B1ANS9 1081 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 MSH4O15457 936 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 MAGEB2O15479 319 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 LINC01565O15544 149 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 ZNF862O60290 1169 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 IRS1P35568 1242 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 NLRP5P59047 1200 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
CLK3-211ENST00000563297 CLUL1Q15846 466 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 EFCAB12Q6NXP0 572 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
CLK3-211ENST00000563297 CEP131Q9UPN4 1083 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 C5orf42Q9H799 3197 aa17.81■□□□□ 0.44
CLK3-211ENST00000563297 C19orf67A6NJJ6 358 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 MBTPS2O43462 519 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 CLCN3P51790 818 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 ZP2Q05996 745 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 DSC3Q14574 896 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 ADGRD2Q7Z7M1 963 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 LINC01465Q8N7H1 131 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 FAM167AQ96KS9 214 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 RIT2Q99578 217 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 NRBP2Q9NSY0 501 aa17.8■□□□□ 0.44
CLK3-211ENST00000563297 TBKBP1A7MCY6 615 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 EPB41L2O43491 1005 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 TBX10O75333 385 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 ALADP13716 330 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 PLA2G5P39877 138 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 NLRP11P59045 1033 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 SMAD2Q15796 467 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 ADHFE1Q8IWW8 467 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 TBCKQ8TEA7 893 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 SLC5A5Q92911 643 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 GJA10Q969M2 543 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 ADAMTS10Q9H324 1103 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 ELAC1Q9H777 363 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 TYW1Q9NV66 732 aaKnown RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 ARIH1Q9Y4X5 557 aaPredicted RBP17.79■□□□□ 0.44
CLK3-211ENST00000563297 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 PLXNA4Q9HCM2 1894 aa17.79■□□□□ 0.44
CLK3-211ENST00000563297 OATP04181 439 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 TMOD1P28289 359 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 UGCGQ16739 394 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 SPOUT1Q5T280 376 aaKnown RBP17.78■□□□□ 0.44
CLK3-211ENST00000563297 LRRC71Q8N4P6 559 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 PPP2R3CQ969Q6 453 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 ZNF274Q96GC6 653 aaPredicted RBP17.78■□□□□ 0.44
CLK3-211ENST00000563297 MSLNLQ96KJ4 702 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 TEKT3Q9BXF9 490 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 UNC45AQ9H3U1 944 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 ATP6V0A4Q9HBG4 840 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 TMEM161AQ9NX61 479 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 HCSTQ9UBK5 93 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 CD207Q9UJ71 328 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 PCDHA4Q9UN74 947 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 CYP46A1Q9Y6A2 500 aa17.78■□□□□ 0.44
CLK3-211ENST00000563297 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 M0R2N6 131 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 CHMP2AO43633 222 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 GAS7O60861 476 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 PSMD10O75832 226 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 FGFR1P11362 822 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 EIF4BP23588 611 aaKnown RBP17.77■□□□□ 0.44
CLK3-211ENST00000563297 CYP3A7P24462 503 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 SFNP31947 248 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 NRIP1P48552 1158 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 UBE3AQ05086 875 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 Q4G0T1 1027 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 LRCH2Q5VUJ6 765 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.44
CLK3-211ENST00000563297 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 ZNF710Q8N1W2 664 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 FAM122AQ96E09 287 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 MAP7D2Q96T17 732 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 TM6SF1Q9BZW5 370 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 CWH43Q9H720 699 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
CLK3-211ENST00000563297 PRR33A8MZF0 331 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 DCXO43602 365 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 DEXIO95424 95 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 EYA4O95677 639 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 NDUFV1P49821 464 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 JAK3P52333 1124 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 PRKCEQ02156 737 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 SMAD4Q13485 552 aaKnown RBP17.76■□□□□ 0.43
CLK3-211ENST00000563297 TARBP2Q15633 366 aaKnown RBP17.76■□□□□ 0.43
CLK3-211ENST00000563297 NPY5RQ15761 445 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 COLGALT1Q8NBJ5 622 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms