RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SEPT9Q9UHD8 586 aaPredicted RBP16.4■□□□□ 0.22
CDH11-207ENST00000563255 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
CDH11-207ENST00000563255 PVALEFA0A1B0GWK0 134 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 F2P00734 622 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 BEX3Q00994 111 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 TARBP2Q15633 366 aaKnown RBP16.39■□□□□ 0.21
CDH11-207ENST00000563255 PADI6Q6TGC4 694 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 DDX12PQ92771 950 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
CDH11-207ENST00000563255 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 LBHD1Q9BQE6 289 aaPredicted RBP16.39■□□□□ 0.21
CDH11-207ENST00000563255 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 KATNAL1Q9BW62 490 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 BLZF1Q9H2G9 400 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.21
CDH11-207ENST00000563255 LAMA2P24043 3122 aaKnown RBP16.39■□□□□ 0.21
CDH11-207ENST00000563255 COL1A2P08123 1366 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 HAS3O00219 553 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 DNM1LO00429 736 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 DGAT1O75907 488 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 PGK1P00558 417 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 ZNF286BP0CG31 522 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 CASP1P29466 404 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 NPEPPSP55786 919 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 GIT2Q14161 759 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 KCNB1Q14721 858 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 ZNF484Q5JVG2 852 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 PLA2G4FQ68DD2 849 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 EXOC8Q8IYI6 725 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 PCSK9Q8NBP7 692 aaKnown RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 ARRDC4Q8NCT1 418 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 KAT2BQ92831 832 aa16.38■□□□□ 0.21
CDH11-207ENST00000563255 ERCC4Q92889 916 aaPredicted RBP16.38■□□□□ 0.21
CDH11-207ENST00000563255 SYCE3A1L190 88 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 TMEM150BA6NC51 233 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 KLRC4O43908 158 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 MYL3P08590 195 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 MARK3P27448 753 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 RFC5P40937 340 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 UNC13DQ70J99 1090 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
CDH11-207ENST00000563255 RNF180Q86T96 592 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 TRIML1Q8N9V2 468 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
CDH11-207ENST00000563255 TSEN34Q9BSV6 310 aaKnown RBP16.37■□□□□ 0.21
CDH11-207ENST00000563255 RUSC1Q9BVN2 902 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 DHX33Q9H6R0 707 aaKnown RBP16.37■□□□□ 0.21
CDH11-207ENST00000563255 PDLIM7Q9NR12 457 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 PRKAG2Q9UGJ0 569 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
CDH11-207ENST00000563255 EYSQ5T1H1 3165 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 KRT18P05783 430 aaKnown RBP16.36■□□□□ 0.21
CDH11-207ENST00000563255 PSEN2P49810 448 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 ZNF445P59923 1031 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 ASIC1P78348 528 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 KCNA10Q16322 511 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 MTERF2Q49AM1 385 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 SH2D3AQ9BRG2 576 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 MTG1Q9BT17 334 aaPredicted RBP16.36■□□□□ 0.21
CDH11-207ENST00000563255 FUCA2Q9BTY2 467 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 GTPBP4Q9BZE4 634 aaKnown RBP16.36■□□□□ 0.21
CDH11-207ENST00000563255 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
CDH11-207ENST00000563255 TRPC6Q9Y210 931 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
CDH11-207ENST00000563255 SIP14410 1827 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 NPHP3-ACAD11A0A0J9YXS1 232 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 ZBTB42B2RXF5 422 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 MAFO75444 373 aaPredicted RBP16.35■□□□□ 0.21
CDH11-207ENST00000563255 RHOBTB3O94955 611 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 INSRRP14616 1297 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 RTP1P59025 263 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 EHHADHQ08426 723 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 PSMD2Q13200 908 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 MFSD10Q14728 455 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 LRRC41Q15345 812 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
CDH11-207ENST00000563255 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms