RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GPR158Q5T848 1215 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 VASNQ6EMK4 673 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 FKBP9P1Q75LS8 142 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 DNERQ8NFT8 737 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ASB15Q8WXK1 588 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 GPR101Q96P66 508 aaPredicted RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ELF4Q99607 663 aaPredicted RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 PCIF1Q9H4Z3 704 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 CD248Q9HCU0 757 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 DLL4Q9NR61 685 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 SPTLC3Q9NUV7 552 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 H2AFY2Q9P0M6 372 aaPredicted RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 BTBD7Q9P203 1132 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ADAM29Q9UKF5 820 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ATP8A1Q9Y2Q0 1164 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 NOP58Q9Y2X3 529 aaKnown RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ASB1Q9Y576 335 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 PRAMEF25A6NGN4 478 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 RASSF10A6NK89 507 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 ZNF839A8K0R7 811 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 TGM5O43548 720 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 RAB11FIP3O75154 756 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 KLHL18O94889 574 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 ENO2P09104 434 aaPredicted RBP4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 ANAPC15P60006 121 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 PHC1P78364 1004 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 SMAD3P84022 425 aaKnown RBP4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 LRRC32Q14392 662 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 STAT4Q14765 748 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 TMEM132BQ14DG7 1078 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 EPHA7Q15375 998 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 SMAD2Q15796 467 aaKnown RBP4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 SLFN13Q68D06 897 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 Q6ZUG5 572 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 C11orf74Q86VG3 221 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 CIR1Q86X95 450 aaPredicted RBP4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 NUDT10Q8NFP7 164 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 NUDT11Q96G61 164 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 C16orf92Q96LL3 132 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 PTPN18Q99952 460 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 KLC2Q9H0B6 622 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 EMC7Q9NPA0 242 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 JADE2Q9NQC1 790 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 TSC22D4Q9Y3Q8 395 aa4.51□□□□□ -1.69
SHCBP1-202ENST00000563219 GPR39O43194 453 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 AKAP8O43823 692 aaKnown RBP4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 MPIG6BO95866 241 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 KNG1P01042 644 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 MMEP08473 750 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 SLC9A1P19634 815 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PTGS1P23219 599 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 ID4P47928 161 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PFKPQ01813 784 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 CDSNQ15517 529 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 ATP13A4Q4VNC1 1196 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PHF19Q5T6S3 580 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 ESRP1Q6NXG1 681 aaKnown RBP4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 RTN4RL1Q86UN2 441 aaPredicted RBP4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PASD1Q8IV76 773 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 ZZZ3Q8IYH5 903 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 SH3RF3Q8TEJ3 882 aaPredicted RBP4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 FOXRED1Q96CU9 486 aaPredicted RBP4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 ZMAT4Q9H898 229 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 TOMM22Q9NS69 142 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PHLDB1Q86UU1 1377 aa4.5□□□□□ -1.69
SHCBP1-202ENST00000563219 PATE3B3GLJ2 98 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 GOLGA6L22H0YM25 854 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ULK1O75385 1050 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 FBXO21O94952 628 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 PTX3P26022 381 aaPredicted RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 CDKN1CP49918 316 aaPredicted RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ADCY1Q08828 1119 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 TERF2Q15554 542 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 SKIDA1Q1XH10 827 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 RNF219Q5W0B1 726 aaPredicted RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 LHFPL2Q6ZUX7 228 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 SPRED1Q7Z699 444 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 NECAB2Q7Z6G3 386 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 NME9Q86XW9 330 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 SPATS2Q86XZ4 545 aaKnown RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 RPUSD2Q8IZ73 545 aaKnown RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 PRPF38AQ8NAV1 312 aaKnown RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ATL2Q8NHH9 583 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 SLC5A5Q92911 643 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 AJUBAQ96IF1 538 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 WWC2-AS2Q96NR7 200 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 GBP4Q96PP9 640 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 CDK5RAP1Q96SZ6 601 aaKnown RBP4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 SLC39A2Q9NP94 309 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 KCND1Q9NSA2 647 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ARHGAP20Q9P2F6 1191 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ARHGAP28Q9P2N2 729 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ZFP69BQ9UJL9 534 aa4.49□□□□□ -1.69
SHCBP1-202ENST00000563219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 FSHBP01225 129 aa4.48□□□□□ -1.69
SHCBP1-202ENST00000563219 CD40P25942 277 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms