RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SLC24A5Q71RS6 500 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 METTL13Q8N6R0 699 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 C1orf112Q9NSG2 853 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CLEC1BQ9P126 229 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 HCSTQ9UBK5 93 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CD207Q9UJ71 328 aa18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 MYH9P35579 1960 aaKnown RBP18.92■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 TBKBP1A7MCY6 615 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 NDUFV1P49821 464 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CLCN3P51790 818 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 EFHBQ8N7U6 833 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SLC26A6Q9BXS9 759 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 VPS54Q9P1Q0 977 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 WDR81Q562E7 1941 aa18.91■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 MSH4O15457 936 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 EYA4O95677 639 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 GLP2RO95838 553 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 NRIP1P48552 1158 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 FAM189BP81408 668 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 DSC3Q14574 896 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ODR4Q5SWX8 454 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 RBM23Q86U06 439 aaKnown RBP18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 LINC01465Q8N7H1 131 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 BICD2Q8TD16 824 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 PPP2R3CQ969Q6 453 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 NCOA5Q9HCD5 579 aaKnown RBP18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 CEP131Q9UPN4 1083 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 SAMM50Q9Y512 469 aa18.9■□□□□ 0.62
VPS9D1-AS1-201ENST00000562298 ZNF862O60290 1169 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 FGFR1P11362 822 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 IFNAR1P17181 557 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PDIA3P30101 505 aaKnown RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 EVCP57679 992 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 UGCGQ16739 394 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 SPOUT1Q5T280 376 aaKnown RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 LRRC71Q8N4P6 559 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CCDC148Q8NFR7 591 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ADAMTS10Q9H324 1103 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CWH43Q9H720 699 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TYW1Q9NV66 732 aaKnown RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TMEM161AQ9NX61 479 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 BARX2Q9UMQ3 279 aaPredicted RBP18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PCDHB12Q9Y5F1 795 aa18.89■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 WDR64B1ANS9 1081 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 MAGEB2O15479 319 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 FGF18O76093 207 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 NLRP11P59045 1033 aaKnown RBP18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CCT2P78371 535 aaKnown RBP18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 EFCAB12Q6NXP0 572 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 COLGALT1Q8NBJ5 622 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 SMRP1Q8NCR6 262 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 GJA10Q969M2 543 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CCDC136Q96JN2 1154 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 FAM167AQ96KS9 214 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 AAASQ9NRG9 546 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 DISC1Q9NRI5 854 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 AKT3Q9Y243 479 aa18.88■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PER2O15055 1255 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 OATP04181 439 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ERVFC1P60507 584 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RBM10P98175 930 aaKnown RBP18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PRKCEQ02156 737 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 UBE3AQ05086 875 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 COASYQ13057 564 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TOB2Q14106 344 aaPredicted RBP18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CSPP1Q1MSJ5 1256 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 UPF3BQ9BZI7 483 aaKnown RBP18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ATP6V0A4Q9HBG4 840 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TLR9Q9NR96 1032 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 MUTYHQ9UIF7 546 aa18.87■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CHMP2AO43633 222 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 PSMA5P28066 241 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 USP11P51784 963 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 LRRC55Q6ZSA7 311 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RNF135Q8IUD6 432 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 THNSL1Q8IYQ7 743 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 VN1R2Q8NFZ6 395 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 MICAL1Q8TDZ2 1067 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 ZNF668Q96K58 619 aaPredicted RBP18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 CASD1Q96PB1 797 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 MAP7D2Q96T17 732 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 RIT2Q99578 217 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 UNC45AQ9H3U1 944 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TLE6Q9H808 572 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 SH3GLB2Q9NR46 395 aa18.86■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 FSCN2O14926 492 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 GAS7O60861 476 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 REC8O95072 547 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 EIF4BP23588 611 aaKnown RBP18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 TMOD1P28289 359 aa18.85■□□□□ 0.61
VPS9D1-AS1-201ENST00000562298 HERC4Q5GLZ8 1057 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms