RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 DHX32Q7L7V1 743 aaKnown RBP6.08□□□□□ -1.44
CAPN3-211ENST00000562199 FASTKD5Q7L8L6 764 aaKnown RBP6.08□□□□□ -1.44
CAPN3-211ENST00000562199 ZER1Q7Z7L7 766 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 NLRP10Q86W26 655 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 THNSL2Q86YJ6 484 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 FAM114A1Q8IWE2 563 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 AADATQ8N5Z0 425 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 ZNF540Q8NDQ6 660 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 TRIM58Q8NG06 486 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 OR52K2Q8NGK3 314 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 HOOK2Q96ED9 719 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 IFT43Q96FT9 208 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 CNDP1Q96KN2 507 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 TNIP3Q96KP6 325 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 CEP295NLQ96MC4 621 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
CAPN3-211ENST00000562199 RHOBTB2Q9BYZ6 727 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 HELLSQ9NRZ9 838 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 ABCF3Q9NUQ8 709 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 NFKBIL1Q9UBC1 381 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-211ENST00000562199 HECAQ9UBI9 543 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-211ENST00000562199 DDX19BQ9UMR2 479 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 LEMD3Q9Y2U8 911 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 FRMPD1Q5SYB0 1578 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 ERCC6L2Q5T890 1561 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 HECW2Q9P2P5 1572 aa6.08□□□□□ -1.44
CAPN3-211ENST00000562199 CLTCQ00610 1675 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 KDRP35968 1356 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ANKRD36BQ8N2N9 1353 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 PIK3C2BO00750 1634 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ADGRF5Q8IZF2 1346 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 E2F8A0AVK6 867 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 MASP2O00187 686 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TREHO43280 583 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ZBTB43O43298 467 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 XPOTO43592 962 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 OFD1O75665 1012 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 SNUPNO95149 360 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CD4P01730 458 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 SSBP05455 408 aaKnown RBP eCLIP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 RARAP10276 462 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 STMN1P16949 149 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 XPAP23025 273 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ATP5DP30049 168 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CHKAP35790 457 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 STAT3P40763 770 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 MAPK9P45984 424 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TM4SF4P48230 202 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CTCFP49711 727 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ARSDP51689 593 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CCNHP51946 323 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TUBA1BP68363 451 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 PPP2R5DQ14738 602 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 PSMD6Q15008 389 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CLUL1Q15846 466 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 IMMTQ16891 758 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 KRT71Q3SY84 523 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ANKDD1AQ495B1 522 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 PERM1Q5SV97 790 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 GPATCH4Q5T3I0 446 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ELMSAN1Q6PJG2 1045 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CNSTQ6PJW8 725 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TUBA1AQ71U36 451 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 DGLUCYQ7Z3D6 616 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 FMR1NBQ8N0W7 255 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TRIML2Q8N7C3 387 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 RNF214Q8ND24 703 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ANKRD20A12PQ8NF67 263 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 MIPOL1Q8TD10 442 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 OTUD7AQ8TE49 926 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 ANKRD7Q92527 254 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 TP53INP1Q96A56 240 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 LENG1Q96BZ8 264 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 NRBF2Q96F24 287 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 PPP1R9BQ96SB3 815 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 MRPL46Q9H2W6 279 aaKnown RBP6.07□□□□□ -1.44
CAPN3-211ENST00000562199 NRDE2Q9H7Z3 1164 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 MTRRQ9UBK8 725 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 RIMKLBQ9ULI2 386 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 SPO11Q9Y5K1 396 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
CAPN3-211ENST00000562199 GAKO14976 1311 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 ABHD14A-ACY1A0A1B0GW23 586 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 OPLAHO14841 1288 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 DIAPH2O60879 1101 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 CSPG5O95196 566 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 TGDSO95455 350 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 YEATS4O95619 227 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 MT-ND3P03897 115 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 S100A6P06703 90 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 PHKG2P15735 406 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 EIF4BP23588 611 aaKnown RBP6.06□□□□□ -1.44
CAPN3-211ENST00000562199 PBLDP30039 288 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-211ENST00000562199 ETFBP38117 255 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 ECE1P42892 770 aa6.06□□□□□ -1.44
CAPN3-211ENST00000562199 CCT8P50990 548 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms