RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SLC26A2P50443 739 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 EVCP57679 992 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 PRKCEQ02156 737 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 SCRN1Q12765 414 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 PTPROQ16827 1216 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 INF2Q27J81 1249 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 TCEAL5Q5H9L2 206 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 ZNF484Q5JVG2 852 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 MCTP2Q6DN12 878 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 RTN4RL1Q86UN2 441 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 KIAA0319LQ8IZA0 1049 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 BLIDQ8IZY5 108 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 MRPL38Q96DV4 380 aaKnown RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 ZNF274Q96GC6 653 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 SCLT1Q96NL6 688 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 SAMD11Q96NU1 681 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 TEKT3Q9BXF9 490 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 SLKQ9H2G2 1235 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 UBE2ZQ9H832 354 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 DISC1Q9NRI5 854 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 GJB4Q9NTQ9 266 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 LMCD1Q9NZU5 365 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 SEPT9Q9UHD8 586 aaPredicted RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 TPCN1Q9ULQ1 816 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
GINS3-204ENST00000561952 COL1A2P08123 1366 aa9.32□□□□□ -0.92
GINS3-204ENST00000561952 NCOR1O75376 2440 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 DENND3A2RUS2 1198 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 H3BQ06 376 aaPredicted RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 GRM6O15303 877 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 DGKIO75912 1065 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 OATP04181 439 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 HOXB3P14651 431 aaPredicted RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 CIITAP33076 1130 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 CLUL1Q15846 466 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 LETM2Q2VYF4 491 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 MTERF2Q49AM1 385 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 TIGD5Q53EQ6 642 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 SPOUT1Q5T280 376 aaKnown RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 MIER3Q7Z3K6 550 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 FAM228AQ86W67 206 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 NPAS4Q8IUM7 802 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 NME8Q8N427 588 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 NECAB1Q8N987 351 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 MAP7D2Q96T17 732 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 ADAM2Q99965 735 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 FTHL17Q9BXU8 183 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 TM6SF1Q9BZW5 370 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 IGFLR1Q9H665 355 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 RC3H2Q9HBD1 1191 aaKnown RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 ERVK-5Q9HDB9 667 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 ALG13Q9NP73 1137 aaKnown RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 SH3GLB2Q9NR46 395 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 ST3GAL5Q9UNP4 418 aa9.31□□□□□ -0.92
GINS3-204ENST00000561952 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
GINS3-204ENST00000561952 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 TBKBP1A7MCY6 615 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 EPB41L2O43491 1005 aaKnown RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 SLC37A4O43826 429 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 ZNF862O60290 1169 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 LARGE1O95461 756 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 LINC00271P0C7V0 271 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 STAG3L1P0CL83 205 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 IL9P15248 144 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 FGFR4P22455 802 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 BMPR1AP36894 532 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 USP11P51784 963 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 AK2P54819 239 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 NLRP11P59045 1033 aaKnown RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
GINS3-204ENST00000561952 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 EFCAB12Q6NXP0 572 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 RNF169Q8NCN4 708 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 SLC5A5Q92911 643 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 ZNF689Q96CS4 500 aaPredicted RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 FAM167AQ96KS9 214 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 C11orf84Q9BUA3 381 aaPredicted RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 NSUN3Q9H649 340 aaKnown RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 CLDND1Q9NY35 253 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 DDX25Q9UHL0 483 aaKnown RBP9.3□□□□□ -0.92
GINS3-204ENST00000561952 CEP131Q9UPN4 1083 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 PCDHB7Q9Y5E2 793 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 KDM3AQ9Y4C1 1321 aa9.3□□□□□ -0.92
GINS3-204ENST00000561952 ARID2Q68CP9 1835 aa9.29□□□□□ -0.92
GINS3-204ENST00000561952 GPR32O75388 356 aa9.29□□□□□ -0.92
GINS3-204ENST00000561952 CSDE1O75534 798 aaKnown RBP9.29□□□□□ -0.92
GINS3-204ENST00000561952 PSMD10O75832 226 aa9.29□□□□□ -0.92
GINS3-204ENST00000561952 CDKL5O76039 1030 aa9.29□□□□□ -0.92
GINS3-204ENST00000561952 GTF2F1P35269 517 aaKnown RBP eCLIP9.29□□□□□ -0.92
GINS3-204ENST00000561952 SARSP49591 514 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms