RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 C1orf186Q6ZWK4 172 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 EPM2AIP1Q7L775 607 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GPBP1Q86WP2 473 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 LRRC8AQ8IWT6 810 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ZC3H3Q8IXZ2 948 aaKnown RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 KIAA1524Q8TCG1 905 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 P2RX5Q93086 422 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 OPTNQ96CV9 577 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GPRASP2Q96D09 838 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 FGD4Q96M96 766 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 SENP7Q9BQF6 1050 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 RUSC1Q9BVN2 902 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 TEKT3Q9BXF9 490 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 ASCC2Q9H1I8 757 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 THAP9Q9H5L6 903 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 BCAS3Q9H6U6 928 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 TXNRD2Q9NNW7 524 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 SLC39A2Q9NP94 309 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 SPTLC3Q9NUV7 552 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 DNM3Q9UQ16 869 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 GNEQ9Y223 722 aaKnown RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 CTDP1Q9Y5B0 961 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-210ENST00000561817 WDR81Q562E7 1941 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 KIAA1217Q5T5P2 1943 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 THSD7BQ9C0I4 1608 aa7.26□□□□□ -1.25
CAPN3-210ENST00000561817 PSMA7O14818 248 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 NKRFO15226 690 aaKnown RBP eCLIP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 STBD1O95210 358 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 SERPINC1P01008 464 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 KCNA2P16389 499 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 CCND2P30279 289 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 ICAM3P32942 547 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF157P51786 506 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 COPB1P53618 953 aaKnown RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 CYP4A11Q02928 519 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 PABPC4Q13310 644 aaKnown RBP eCLIP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 MTMR1Q13613 665 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 PTPN21Q16825 1174 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 TCP11X2Q5H9J9 407 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 FAM26FQ5R3K3 315 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 ARHGEF16Q5VV41 709 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 CST9Q5W186 159 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 RINT1Q6NUQ1 792 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 LRRC55Q6ZSA7 311 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 TMC6Q7Z403 805 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 FAM133AQ8N9E0 248 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF507Q8TCN5 953 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 NEK9Q8TD19 979 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 NSUN6Q8TEA1 469 aaKnown RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 NOC3LQ8WTT2 800 aaKnown RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 SCFD1Q8WVM8 642 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 CCDC47Q96A33 483 aaKnown RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 FIZ1Q96SL8 496 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 REEP2Q9BRK0 252 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 MOV10L1Q9BXT6 1211 aaKnown RBP7.25□□□□□ -1.25
CAPN3-210ENST00000561817 SPATC1LQ9H0A9 340 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 KCTD10Q9H3F6 313 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 TMX1Q9H3N1 280 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 VRTNQ9H8Y1 702 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 TBC1D22BQ9NU19 505 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 PANK4Q9NVE7 773 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 LOXHD1Q8IVV2 1947 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 NFASCO94856 1347 aa7.25□□□□□ -1.25
CAPN3-210ENST00000561817 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 RSPH10B2B2RC85 870 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 SPATA31C2B4DYI2 1134 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 KCNJ18B7U540 433 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 J3QL48 77 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 CHMP2AO43633 222 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 STAM2O75886 525 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 P4HBP07237 508 aaKnown RBP7.24□□□□□ -1.25
CAPN3-210ENST00000561817 RSPH10BP0C881 870 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 MYCLP12524 364 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-210ENST00000561817 EEF1GP26641 437 aaKnown RBP7.24□□□□□ -1.25
CAPN3-210ENST00000561817 SSTR3P32745 418 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-210ENST00000561817 CASP5P51878 434 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF131P52739 623 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 GSDMDP57764 484 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 FKBP1BP68106 108 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 SKOR1P84550 965 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 CNTN2Q02246 1040 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 SPAG1Q07617 926 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 MAPK7Q13164 816 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 STIM1Q13586 685 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 KCNJ12Q14500 433 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 LRRC41Q15345 812 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 UGCGQ16739 394 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 BMT2Q1RMZ1 405 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 DEFB115Q30KQ5 88 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 FASTKD5Q7L8L6 764 aaKnown RBP7.24□□□□□ -1.25
CAPN3-210ENST00000561817 FILIP1Q7Z7B0 1213 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 TMEM139Q8IV31 216 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 TPH2Q8IWU9 490 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 CCDC65Q8IXS2 484 aa7.24□□□□□ -1.25
CAPN3-210ENST00000561817 DRC7Q8IY82 874 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms