RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 PPP4R3AQ6IN85 833 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 DENND5AQ6IQ26 1287 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 DBX2Q6ZNG2 339 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 STRA8Q7Z7C7 330 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 RASSF3Q86WH2 238 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 RIOX2Q8IUF8 465 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 FAM126BQ8IXS8 530 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 Q8N1Y9 231 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 CLASRPQ8N2M8 674 aaKnown RBP4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 KYQ8NBH2 561 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 ST13P5Q8NFI4 369 aaPredicted RBP4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 TMEM169Q96HH4 297 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 TARS2Q9BW92 718 aaKnown RBP4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 RHOBTB2Q9BYZ6 727 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 CCDC8Q9H0W5 538 aaPredicted RBP4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 CSRNP2Q9H175 543 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 IPPQ9Y573 584 aa4.13□□□□□ -1.75
TNRC6A-208ENST00000561726 K7ESM1 405 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 MYO1BO43795 1136 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 RHOBTB3O94955 611 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 CPP00450 1065 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 FAM153BP0C7A2 387 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 U2AF1L5P0DN76 240 aaPredicted RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 TGFB3P10600 412 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 PHKG2P15735 406 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 TYRP1P17643 537 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 RPL13P26373 211 aaKnown RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 LTBRP36941 435 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 GFRA1P56159 465 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 U2AF1Q01081 240 aaKnown RBP eCLIP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 STK3Q13188 491 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 DDX10Q13206 875 aaKnown RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 KCNAB2Q13303 367 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 CR1LQ2VPA4 569 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 RGL3Q3MIN7 710 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 COBLL1Q53SF7 1204 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 FAM133BQ5BKY9 247 aaKnown RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 CNNM4Q6P4Q7 775 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 C1orf228Q6PIY5 440 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 HHIPL2Q6UWX4 724 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 MAATS1Q7Z4T9 603 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 ANKRD23Q86SG2 305 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 ZC3H18Q86VM9 953 aaKnown RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 PPIL6Q8IXY8 311 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 TMEM145Q8NBT3 493 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 WDR66Q8TBY9 1149 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 RSPH1Q8WYR4 309 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 ZNF669Q96BR6 464 aaPredicted RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 CHAMP1Q96JM3 812 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 RETREG1Q9H6L5 497 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 PCDH18Q9HCL0 1135 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 ISY1Q9ULR0 285 aaKnown RBP4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 PCDHA2Q9Y5H9 948 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 PHLDB1Q86UU1 1377 aa4.12□□□□□ -1.75
TNRC6A-208ENST00000561726 hCG_1984214I3L0E3 225 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 APAF1O14727 1248 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 ORC4O43929 436 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 SNX2O60749 519 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 CAPNS1P04632 268 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 ITGB3P05106 788 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 FAM200BP0CF97 657 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 TNFAIP3P21580 790 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 GRIA2P42262 883 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 RENBPP51606 427 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 GTF2A2P52657 109 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 ZNF280AP59817 542 aaPredicted RBP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 STRN3Q13033 797 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 LSAMPQ13449 338 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 PDE1CQ14123 709 aaPredicted RBP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 KRT72Q14CN4 511 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 SAFBQ15424 915 aaKnown RBP eCLIP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 TESK1Q15569 626 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 PRR31Q5SQ13 230 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 ARMC3Q5W041 872 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 RNF219Q5W0B1 726 aaPredicted RBP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 MCTP2Q6DN12 878 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 LHFPL2Q6ZUX7 228 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 DDX46Q7L014 1031 aaKnown RBP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 TTLL6Q8N841 843 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 ARRDC4Q8NCT1 418 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 GJA10Q969M2 543 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 PGBD4Q96DM1 585 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 C1orf159Q96HA4 380 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 CCDC140Q96MF4 163 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 SERINC2Q96SA4 455 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.11□□□□□ -1.751e-8■■□□□ 11.8
TNRC6A-208ENST00000561726 RIC8AQ9NPQ8 531 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 IP6K2Q9UHH9 426 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 TRHDEQ9UKU6 1024 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 FAM50BQ9Y247 325 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 COA3Q9Y2R0 106 aaPredicted RBP4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 SPEF1Q9Y4P9 236 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 DGKBQ9Y6T7 804 aa4.11□□□□□ -1.75
TNRC6A-208ENST00000561726 H7BY64 318 aa4.1□□□□□ -1.75
TNRC6A-208ENST00000561726 DDX3XO00571 662 aaKnown RBP eCLIP4.1□□□□□ -1.75
TNRC6A-208ENST00000561726 HGSO14964 777 aaPredicted RBP4.1□□□□□ -1.75
TNRC6A-208ENST00000561726 CLGNO14967 610 aa4.1□□□□□ -1.75
TNRC6A-208ENST00000561726 GPR39O43194 453 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms