RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 KMT5AQ9NQR1 393 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 SYNGAP1Q96PV0 1343 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 LIFRP42702 1097 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 RAB44Q7Z6P3 723 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 PIDD1Q9HB75 910 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
GTF3C1-202ENST00000561623 GRID2IPA4D2P6 1211 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 CTTNQ14247 550 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ZBTB41Q5SVQ8 909 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ARL6IP4Q66PJ3 421 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 MTIF3Q9H2K0 278 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 WARS2Q9UGM6 360 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 AMACRQ9UHK6 382 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 APOBEC2Q9Y235 224 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 YEATS2Q9ULM3 1422 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ARFIP2P53365 341 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 SKA2Q8WVK7 121 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 FAF2Q96CS3 445 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 CHP1Q99653 195 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 DIS3Q9Y2L1 958 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 CDC27P30260 824 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 SCARA5Q6ZMJ2 495 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 POTEMA6NI47 508 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 NUDCD3Q8IVD9 361 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 AMNQ9BXJ7 453 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 MIS12Q9H081 205 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 PARVGQ9HBI0 331 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC4A1P02730 911 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 HNRNPH1P31943 449 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ASPRV1Q53RT3 343 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 MDH1BQ5I0G3 518 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 FAM83BQ5T0W9 1011 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 METTL16Q86W50 562 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 NLGN1Q8N2Q7 840 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 SEPT8Q92599 483 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 ATP6V1E2Q96A05 226 aa10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-202ENST00000561623 PP2D1A8MPX8 630 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 ERVV-2B6SEH9 535 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 H0YCG3 227 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CHN1P15882 459 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 IGBP1P78318 339 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CCNA1P78396 465 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 UNC13DQ70J99 1090 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CEP19Q96LK0 163 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 FMR1Q06787 632 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■□□ 15.8
GTF3C1-202ENST00000561623 WDR75Q8IWA0 830 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 UPF3AQ9H1J1 476 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CCPG1Q9ULG6 757 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SMAD1Q15797 465 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 RYBPQ8N488 228 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 EXT2Q93063 718 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 ZNF277Q9NRM2 450 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 MLH3Q9UHC1 1453 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 FOSP01100 380 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SNAP25P60880 206 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 OCRLQ01968 901 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CDO1Q16878 200 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 KIF2BQ8N4N8 673 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 FAM149B1Q96BN6 582 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 IPO5O00410 1097 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 STAT2P52630 851 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SEC24CP53992 1094 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 IRX1P78414 480 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 PASD1Q8IV76 773 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 TMEM206Q9H813 350 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SCHIP1Q9P0W5 487 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 TTI1O43156 1089 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 TSTA3Q13630 321 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 NCAPHQ15003 741 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 HABP4Q5JVS0 413 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 PIM2Q9P1W9 311 aa10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 LIMA1Q9UHB6 759 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-202ENST00000561623 ZBED1O96006 694 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ARL4CP56559 192 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 LRRC36Q1X8D7 754 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 OR6B2Q6IFH4 312 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 KIAA0825Q8IV33 1275 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SEC16BQ96JE7 1060 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 OLFM3Q96PB7 478 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 SLC38A10Q9HBR0 1119 aa10.91□□□□□ -0.66
GTF3C1-202ENST00000561623 TRAF3IP3Q9Y228 551 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms