RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 KRT32Q14532 448 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 CLUL1Q15846 466 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 TMEM266Q2M3C6 531 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 ADCK5Q3MIX3 580 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 ODR4Q5SWX8 454 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 PDE12Q6L8Q7 609 aaKnown RBP9.54□□□□□ -0.88
PALB2-202ENST00000561514 MIS18BP1Q6P0N0 1132 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 FAM228AQ86W67 206 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 PLA2G4DQ86XP0 818 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 HOMEZQ8IX15 550 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 SMAP1Q8IYB5 467 aaPredicted RBP9.54□□□□□ -0.88
PALB2-202ENST00000561514 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 VN1R2Q8NFZ6 395 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
PALB2-202ENST00000561514 EDAQ92838 391 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 LENG9Q96B70 501 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 AGXT2Q9BYV1 514 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 ZNF302Q9NR11 478 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 TBC1D22BQ9NU19 505 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 RNF19AQ9NV58 838 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 TMEM161AQ9NX61 479 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 TMEM260Q9NX78 707 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 MUTYHQ9UIF7 546 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 ST3GAL5Q9UNP4 418 aa9.54□□□□□ -0.88
PALB2-202ENST00000561514 KLF18A0A0U1RQI7 1052 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 BACH1O14867 736 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 GPR182O15218 404 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 EDIL3O43854 480 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 HMGB1P09429 215 aaKnown RBP9.53□□□□□ -0.88
PALB2-202ENST00000561514 NRIP1P48552 1158 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 PKN1Q16512 942 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 DUSP6Q16828 381 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 PAN2Q504Q3 1202 aaKnown RBP9.53□□□□□ -0.88
PALB2-202ENST00000561514 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 EP400NLQ6ZTU2 488 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 COLGALT1Q8NBJ5 622 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 FAM167AQ96KS9 214 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 MFSD14AQ96MC6 490 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 ADAM2Q99965 735 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 PHF7Q9BWX1 381 aaPredicted RBP9.53□□□□□ -0.88
PALB2-202ENST00000561514 CWH43Q9H720 699 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 USP15Q9Y4E8 981 aaPredicted RBP9.53□□□□□ -0.88
PALB2-202ENST00000561514 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
PALB2-202ENST00000561514 CCDC196A0A1B0GTZ2 297 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 TBKBP1A7MCY6 615 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 ADAMTS3O15072 1205 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 MAGEB2O15479 319 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 FGF18O76093 207 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
PALB2-202ENST00000561514 LAG3P18627 525 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
PALB2-202ENST00000561514 EVCP57679 992 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 NTRK3Q16288 839 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 KIZQ2M2Z5 673 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 FAM102BQ5T8I3 360 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 SWSAP1Q6NVH7 229 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 TRIM67Q6ZTA4 783 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 REXO1Q8N1G1 1221 aaKnown RBP9.52□□□□□ -0.89
PALB2-202ENST00000561514 RSPH1Q8WYR4 309 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 CASD1Q96PB1 797 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 OSMRQ99650 979 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 TMEM117Q9H0C3 514 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 S1PR5Q9H228 398 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 IGFLR1Q9H665 355 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 HCSTQ9UBK5 93 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 LRFN2Q9ULH4 789 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
PALB2-202ENST00000561514 CEP131Q9UPN4 1083 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 PCDHGC5Q9Y5F6 944 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 PCDHA10Q9Y5I2 948 aa9.52□□□□□ -0.89
PALB2-202ENST00000561514 DENND3A2RUS2 1198 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 WDR64B1ANS9 1081 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 DDX39AO00148 427 aaKnown RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 HOXA2O43364 376 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 PRPF3O43395 683 aaKnown RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 ZNF862O60290 1169 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 PSAPP07602 524 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 PPM1AP35813 382 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 ZNF76P36508 570 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 MRE11P49959 708 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 METAP2P50579 478 aaKnown RBP eCLIP9.51□□□□□ -0.89
PALB2-202ENST00000561514 ERVFC1P60507 584 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 IRX6P78412 446 aaPredicted RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 ZXDAP98168 799 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 JAKMIP3Q5VZ66 844 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 B3GNT9Q6UX72 402 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 ZNF598Q86UK7 904 aaKnown RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 LRRC43Q8N309 656 aa9.51□□□□□ -0.89
PALB2-202ENST00000561514 CCDC12Q8WUD4 166 aaPredicted RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 MRPS27Q92552 414 aaKnown RBP9.51□□□□□ -0.89
PALB2-202ENST00000561514 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms