RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 METTL13Q8N6R0 699 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 CLP1Q92989 425 aaKnown RBP18■□□□□ 0.47
LMX1B-204ENST00000561065 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
LMX1B-204ENST00000561065 ORC3Q9UBD5 711 aaPredicted RBP18■□□□□ 0.47
LMX1B-204ENST00000561065 DDX25Q9UHL0 483 aaKnown RBP18■□□□□ 0.47
LMX1B-204ENST00000561065 BDP1A6H8Y1 2624 aa18■□□□□ 0.47
LMX1B-204ENST00000561065 C5orf67F2Z3F1 127 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 RPS6KA5O75582 802 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 SFNP31947 248 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 NFX1Q12986 1120 aaKnown RBP17.99■□□□□ 0.47
LMX1B-204ENST00000561065 LETM2Q2VYF4 491 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 MIER3Q7Z3K6 550 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
LMX1B-204ENST00000561065 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 UHRF1Q96T88 793 aaPredicted RBP17.99■□□□□ 0.47
LMX1B-204ENST00000561065 KCNMB3Q9NPA1 279 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 VAV3Q9UKW4 847 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 COG5Q9UP83 839 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
LMX1B-204ENST00000561065 MRPL42Q9Y6G3 142 aaKnown RBP17.99■□□□□ 0.47
LMX1B-204ENST00000561065 EML1O00423 815 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 JAK2O60674 1132 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 DRP2Q13474 957 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 BTG3Q14201 252 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 TARBP2Q15633 366 aaKnown RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 RDM1Q8NG50 284 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 HLA-CQ95604 372 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 ZNF668Q96K58 619 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 ADAMTS10Q9H324 1103 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 ST3GAL5Q9UNP4 418 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 GRM6O15303 877 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 BMPR1AP36894 532 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 CRYBB1P53674 252 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 NR5A1Q13285 461 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 PAN2Q504Q3 1202 aaKnown RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 EFCAB12Q6NXP0 572 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 CMTR2Q8IYT2 770 aaKnown RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 SH2D3AQ9BRG2 576 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 UBE2ZQ9H832 354 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 HCSTQ9UBK5 93 aa17.98■□□□□ 0.47
LMX1B-204ENST00000561065 SEPT9Q9UHD8 586 aaPredicted RBP17.98■□□□□ 0.47
LMX1B-204ENST00000561065 C9IYK1 514 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 TNFRSF10AO00220 468 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 MAGEB2O15479 319 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 IBSPP21815 317 aaPredicted RBP17.97■□□□□ 0.47
LMX1B-204ENST00000561065 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
LMX1B-204ENST00000561065 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
LMX1B-204ENST00000561065 DSC3Q14574 896 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 TIGD5Q53EQ6 642 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 BANK1Q8NDB2 785 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 HAS1Q92839 578 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 ADAM2Q99965 735 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
LMX1B-204ENST00000561065 LIMCH1Q9UPQ0 1083 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 AKT3Q9Y243 479 aa17.97■□□□□ 0.47
LMX1B-204ENST00000561065 WNT7AO00755 349 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 GPC3P51654 580 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 FOSBP53539 338 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 PPP2R5CQ13362 524 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 CAMK1Q14012 370 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 TRIM29Q14134 588 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 PTPROQ16827 1216 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 AAK1Q2M2I8 961 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 MTERF2Q49AM1 385 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 TCEAL5Q5H9L2 206 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 PPP4R3AQ6IN85 833 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 MAP7D2Q96T17 732 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 RGS18Q9NS28 235 aa17.96■□□□□ 0.46
LMX1B-204ENST00000561065 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 GPR182O15218 404 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 CCNT1O60563 726 aaKnown RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 CSPG5O95196 566 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 RB1P06400 928 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 STAG3L1P0CL83 205 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 SPIRE1Q08AE8 756 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 TBC1D8BQ0IIM8 1120 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 XKR3Q5GH77 459 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 PLA2G4FQ68DD2 849 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 ANO5Q75V66 913 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 NAP1L4Q99733 375 aaKnown RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 C11orf84Q9BUA3 381 aaPredicted RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 NIFKQ9BYG3 293 aaKnown RBP17.95■□□□□ 0.46
LMX1B-204ENST00000561065 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 RWDD3Q9Y3V2 267 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
LMX1B-204ENST00000561065 IGKV6-21A0A0C4DH24 114 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 DENND3A2RUS2 1198 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 MMP1P03956 469 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 FGFR4P22455 802 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 DNAJB1P25685 340 aa17.94■□□□□ 0.46
LMX1B-204ENST00000561065 KRT2P35908 639 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms