RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CTC1Q2NKJ3 1217 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 Q4G0T1 1027 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 LRCH2Q5VUJ6 765 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 EFCAB12Q6NXP0 572 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
SNX1-213ENST00000561026 FAM228AQ86W67 206 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 BLIDQ8IZY5 108 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 FAM177A1Q8N128 213 aaPredicted RBP18.31■□□□□ 0.52
SNX1-213ENST00000561026 SPPL3Q8TCT6 385 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.521e-6■□□□□ 9.7
SNX1-213ENST00000561026 GJA10Q969M2 543 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 TEKT3Q9BXF9 490 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 UNC45AQ9H3U1 944 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
SNX1-213ENST00000561026 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
SNX1-213ENST00000561026 CYP3A7-CYP3A51PA0A087WV96 503 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 CHMP2AO43633 222 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 PSMD10O75832 226 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 ITGB1P05556 798 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 IBSPP21815 317 aaPredicted RBP18.3■□□□□ 0.52
SNX1-213ENST00000561026 CYP3A7P24462 503 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 DNAJB1P25685 340 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 TMOD1P28289 359 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 LTBRP36941 435 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 CLCN3P51790 818 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 JAK3P52333 1124 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 FAM189BP81408 668 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 PRKCEQ02156 737 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 STK3Q13188 491 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 NPY5RQ15761 445 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 UGCGQ16739 394 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 GJD3Q8N144 294 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 ZNF710Q8N1W2 664 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 LINC01465Q8N7H1 131 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 DAGLBQ8NCG7 672 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 ADAMTS10Q9H324 1103 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 TDP2O95551 362 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 NLRP11P59045 1033 aaKnown RBP18.3■□□□□ 0.52
SNX1-213ENST00000561026 LRRC71Q8N4P6 559 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 RDM1Q8NG50 284 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 AKT3Q9Y243 479 aa18.3■□□□□ 0.52
SNX1-213ENST00000561026 CSPG5O95196 566 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 DSC3Q14574 896 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 FAM102BQ5T8I3 360 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 MOXD1Q6UVY6 613 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 B3GNT9Q6UX72 402 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 MBOAT7Q96N66 472 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 FAM50BQ9Y247 325 aa18.29■□□□□ 0.52
SNX1-213ENST00000561026 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 PI4K2BG5E9Z4 385 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 NEFLP07196 543 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 EIF4BP23588 611 aaKnown RBP18.28■□□□□ 0.52
SNX1-213ENST00000561026 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX1-213ENST00000561026 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
SNX1-213ENST00000561026 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX1-213ENST00000561026 TARBP2Q15633 366 aaKnown RBP18.28■□□□□ 0.52
SNX1-213ENST00000561026 MIER3Q7Z3K6 550 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 ETNPPLQ8TBG4 499 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 POF1BQ8WVV4 589 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 IGFLR1Q9H665 355 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 ELAC1Q9H777 363 aaKnown RBP18.28■□□□□ 0.52
SNX1-213ENST00000561026 ATP6V0A4Q9HBG4 840 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 TMEM161AQ9NX61 479 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 RAPGEFL1Q9UHV5 662 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 PCDHB12Q9Y5F1 795 aa18.28■□□□□ 0.52
SNX1-213ENST00000561026 CDKL5O76039 1030 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 SSTR3P32745 418 aaPredicted RBP18.27■□□□□ 0.51
SNX1-213ENST00000561026 IRS1P35568 1242 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 TBC1D8BQ0IIM8 1120 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 SCRN1Q12765 414 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 NIFKQ9BYG3 293 aaKnown RBP18.27■□□□□ 0.51
SNX1-213ENST00000561026 SLKQ9H2G2 1235 aaPredicted RBP18.27■□□□□ 0.51
SNX1-213ENST00000561026 AAASQ9NRG9 546 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 TYW1Q9NV66 732 aaKnown RBP18.27■□□□□ 0.51
SNX1-213ENST00000561026 KCNJ14Q9UNX9 436 aa18.27■□□□□ 0.51
SNX1-213ENST00000561026 ATG2AQ2TAZ0 1938 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 STBD1O95210 358 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 FGFR1P11362 822 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 GPC3P51654 580 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 ADAM15Q13444 863 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 INF2Q27J81 1249 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 TMEM31Q5JXX7 168 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 SPOUT1Q5T280 376 aaKnown RBP18.26■□□□□ 0.51
SNX1-213ENST00000561026 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 ZNF668Q96K58 619 aaPredicted RBP18.26■□□□□ 0.51
SNX1-213ENST00000561026 LRFN3Q9BTN0 628 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 PHF20Q9BVI0 1012 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 PRKAG3Q9UGI9 489 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
SNX1-213ENST00000561026 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 C5orf42Q9H799 3197 aa18.26■□□□□ 0.51
SNX1-213ENST00000561026 LINC01565O15544 149 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 GPR37L1O60883 481 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 TBX10O75333 385 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms