RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RTP1P59025 263 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 RPS8P62241 208 aaKnown RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 SRSF3P84103 164 aaKnown RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 APOBRQ0VD83 1088 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 SLC14A2Q15849 920 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 SUPT20HL1Q3ZLR7 823 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 RTP2Q5QGT7 225 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 TCERG1LQ5VWI1 586 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 GALNT18Q6P9A2 607 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 TMEM151BQ8IW70 566 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 TMEFF1Q8IYR6 380 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 TAB3Q8N5C8 712 aaPredicted RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 TMEM52Q8NDY8 209 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 SLC6A18Q96N87 628 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 SLC9A7Q96T83 725 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 SRRTQ9BXP5 876 aaKnown RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 ZCCHC17Q9NP64 241 aaKnown RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 TNFRSF12AQ9NP84 129 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 PCDHAC2Q9Y5I4 1007 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 ZNF646O15015 1829 aaPredicted RBP4.97□□□□□ -1.61
HERC1-211ENST00000560983 KIF20BQ96Q89 1820 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 PFASO15067 1338 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 ADGRA2Q96PE1 1338 aa4.97□□□□□ -1.61
HERC1-211ENST00000560983 A0A1W2PQ45 241 aaPredicted RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 A0A1W2PQY0 241 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 SSU72P8A0A1W2PR75 194 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 ABLIM1O14639 778 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 UFL1O94874 794 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 ACRP10323 421 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 COL6A1P12109 1028 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 PI3P19957 117 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 FLT3LGP49771 235 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 MMP14P50281 582 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 CDR1P51861 262 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 MRPS5P82675 430 aaKnown RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 LAPTM5Q13571 262 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 AUHQ13825 339 aaKnown RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 VGLL4Q14135 290 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 CBX2Q14781 532 aaPredicted RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 KIR3DS1Q14943 382 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 SHHQ15465 462 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 ANKRD39Q53RE8 183 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 STRIP1Q5VSL9 837 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 MORC1Q86VD1 984 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 NKD1Q969G9 470 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 PHACTR3Q96KR7 559 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 GZF1Q9H116 711 aaPredicted RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 C11orf49Q9H6J7 331 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 GFOD1Q9NXC2 390 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 MIS18AQ9NYP9 233 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 SUCOQ9UBS9 1254 aaKnown RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 TRMT112Q9UI30 125 aaKnown RBP4.96□□□□□ -1.62
HERC1-211ENST00000560983 PCDHB12Q9Y5F1 795 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 PPP2R3BQ9Y5P8 575 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 WDFY4Q6ZS81 3184 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 BDP1A6H8Y1 2624 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 AOX1Q06278 1338 aa4.96□□□□□ -1.62
HERC1-211ENST00000560983 ADAMTS20P59510 1910 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 CETPP11597 493 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 VAV1P15498 845 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 BUD31P41223 144 aaPredicted RBP4.95□□□□□ -1.62
HERC1-211ENST00000560983 SMAD3P84022 425 aaKnown RBP4.95□□□□□ -1.62
HERC1-211ENST00000560983 RASA3Q14644 834 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 LRRC26Q2I0M4 334 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 TMEM31Q5JXX7 168 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 C9orf50Q5SZB4 431 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 KIAA0825Q8IV33 1275 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 PANK1Q8TE04 598 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 GIPC2Q8TF65 315 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 ZNF428Q96B54 188 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 PRMT6Q96LA8 375 aaPredicted RBP4.95□□□□□ -1.62
HERC1-211ENST00000560983 XYLT2Q9H1B5 865 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 RTEL1Q9NZ71 1219 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 OGDHLQ9ULD0 1010 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 PCDHA5Q9Y5H7 936 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 COL4A1P02462 1669 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 ZNF804BA4D1E1 1349 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 SH3TC1Q8TE82 1336 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 SCN9AQ15858 1988 aa4.95□□□□□ -1.62
HERC1-211ENST00000560983 CLRN2A0PK11 232 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 C9IYK1 514 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 DIAPH1O60610 1272 aaKnown RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 WDHD1O75717 1129 aaPredicted RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 GSNP06396 782 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 BMP7P18075 431 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 MOGSQ13724 837 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 OLFML2BQ68BL8 750 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 CRTC3Q6UUV7 619 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 MCM10Q7L590 875 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 IGDCC3Q8IVU1 814 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 RBBP8NLQ8NC74 664 aaPredicted RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERC1-211ENST00000560983 MZB1Q8WU39 189 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 TEPSINQ96N21 525 aa4.94□□□□□ -1.62
HERC1-211ENST00000560983 THUMPD2Q9BTF0 503 aaKnown RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 MKRN2Q9H000 416 aaKnown RBP4.94□□□□□ -1.62
HERC1-211ENST00000560983 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms