RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 HIDE1A8MVS5 230 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 SH2B2O14492 632 aaPredicted RBP21.12■□□□□ 0.97
TPM1-226ENST00000560959 PRC1O43663 620 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 FGFR1P11362 822 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 IBSPP21815 317 aaPredicted RBP21.12■□□□□ 0.97
TPM1-226ENST00000560959 MCM5P33992 734 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 APOBRQ0VD83 1088 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 LRRC55Q6ZSA7 311 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 NIPA1Q7RTP0 329 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 TMC7Q7Z402 723 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 MRPL43Q8N983 215 aaKnown RBP21.12■□□□□ 0.97
TPM1-226ENST00000560959 HCSTQ9UBK5 93 aa21.12■□□□□ 0.97
TPM1-226ENST00000560959 DMDP11532 3685 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 ZBTB42B2RXF5 422 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 GPR32O75388 356 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 LLGL2Q6P1M3 1020 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 TMTC3Q6ZXV5 915 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 ASCL5Q7RTU5 278 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 FANCBQ8NB91 859 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 ZNF558Q96NG5 402 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 RIC8AQ9NPQ8 531 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 SPG21Q9NZD8 308 aa21.11■□□□□ 0.97
TPM1-226ENST00000560959 BACH1O14867 736 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 BRD1O95696 1058 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 CCNE2O96020 404 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 MTHFRP42898 656 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 SMC1AQ14683 1233 aaKnown RBP21.1■□□□□ 0.97
TPM1-226ENST00000560959 KIZQ2M2Z5 673 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 PDXDC2PQ6P474 469 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 HEATR3Q7Z4Q2 680 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 LRRC43Q8N309 656 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 BBXQ8WY36 941 aaPredicted RBP21.1■□□□□ 0.97
TPM1-226ENST00000560959 OSMRQ99650 979 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 GLT8D2Q9H1C3 349 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 ZNF302Q9NR11 478 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 HCFC2Q9Y5Z7 792 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 SLC12A7Q9Y666 1083 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 LOXHD1Q8IVV2 1947 aa21.1■□□□□ 0.97
TPM1-226ENST00000560959 hCG_1642624A0A1W2PR95 340 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 PRR23AA6NEV1 266 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 C2CD4DB7Z1M9 353 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 CLCN5P51795 746 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 BMS1Q14692 1282 aaKnown RBP21.09■□□□□ 0.97
TPM1-226ENST00000560959 ASTLQ6HA08 431 aaPredicted RBP21.09■□□□□ 0.97
TPM1-226ENST00000560959 PPP1R18Q6NYC8 613 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 MIS18BP1Q6P0N0 1132 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 CCDC60Q8IWA6 550 aaPredicted RBP21.09■□□□□ 0.97
TPM1-226ENST00000560959 ZDHHC14Q8IZN3 488 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 PLCD3Q8N3E9 789 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 TMEM105Q8N8V8 129 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 APOL5Q9BWW9 433 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 POMKQ9H5K3 350 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
TPM1-226ENST00000560959 RBM8AQ9Y5S9 174 aaKnown RBP21.09■□□□□ 0.97
TPM1-226ENST00000560959 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 C22orf31O95567 290 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 ZSCAN20P17040 1043 aaPredicted RBP21.08■□□□□ 0.97
TPM1-226ENST00000560959 ATP4AP20648 1035 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 SREBF1P36956 1147 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 AP3B2Q13367 1082 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 SWSAP1Q6NVH7 229 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 ERMP1Q7Z2K6 904 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 ABI1Q8IZP0 508 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 ANO3Q9BYT9 981 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 TSHZ2Q9NRE2 1034 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 USTQ9Y2C2 406 aa21.08■□□□□ 0.97
TPM1-226ENST00000560959 MAFBQ9Y5Q3 323 aaPredicted RBP21.08■□□□□ 0.97
TPM1-226ENST00000560959 CARNS1A5YM72 827 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 MAGEB2O15479 319 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 DHX15O43143 795 aaKnown RBP21.07■□□□□ 0.96
TPM1-226ENST00000560959 RXRAP19793 462 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 SP100P23497 879 aaPredicted RBP21.07■□□□□ 0.96
TPM1-226ENST00000560959 WWC2Q6AWC2 1192 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 MCTP2Q6DN12 878 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 SGMS1Q86VZ5 419 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 SLC39A11Q8N1S5 342 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
TPM1-226ENST00000560959 RSPH1Q8WYR4 309 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 CEP131Q9UPN4 1083 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 PLXNA3P51805 1871 aa21.07■□□□□ 0.96
TPM1-226ENST00000560959 CLASP2O75122 1294 aaKnown RBP21.06■□□□□ 0.96
TPM1-226ENST00000560959 EOMESO95936 686 aa21.06■□□□□ 0.96
TPM1-226ENST00000560959 CLK2P49760 499 aaKnown RBP21.06■□□□□ 0.96
TPM1-226ENST00000560959 NAPAP54920 295 aa21.06■□□□□ 0.96
TPM1-226ENST00000560959 ECHDC2Q86YB7 292 aa21.06■□□□□ 0.96
TPM1-226ENST00000560959 RIF1Q5UIP0 2472 aaKnown RBP21.05■□□□□ 0.96
TPM1-226ENST00000560959 VTNP04004 478 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 EIF4BP23588 611 aaKnown RBP21.05■□□□□ 0.96
TPM1-226ENST00000560959 TMOD1P28289 359 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 ZNF76P36508 570 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 ADCY7P51828 1080 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 GIT2Q14161 759 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 ATAT1Q5SQI0 421 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 KIAA1841Q6NSI8 718 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 TYW1BQ6NUM6 668 aa21.05■□□□□ 0.96
TPM1-226ENST00000560959 ZNF746Q6NUN9 644 aaPredicted RBP21.05■□□□□ 0.96
TPM1-226ENST00000560959 METTL13Q8N6R0 699 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms