RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 NEMFO60524 1076 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 CCNT1O60563 726 aaKnown RBP6.18□□□□□ -1.42
ZEB1-220ENST00000560909 OR52Z1P0C646 297 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ARP10275 920 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 KCNA2P16389 499 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 CMA1P23946 247 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 HOXD10P28358 340 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 FLT3LGP49771 235 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ADGRE1Q14246 886 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 MBTPS1Q14703 1052 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ARHGEF6Q15052 776 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ADALQ6DHV7 355 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 TAPT1Q6NXT6 567 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 KCNV1Q6PIU1 500 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ARMCX2Q7L311 632 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 OTOP1Q7RTM1 612 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 DPP9Q86TI2 863 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 NLRX1Q86UT6 975 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 PLA2G4DQ86XP0 818 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 CCAR1Q8IX12 1150 aaKnown RBP6.18□□□□□ -1.42
ZEB1-220ENST00000560909 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 GBP4Q96PP9 640 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 MPHOSPH6Q99547 160 aaKnown RBP6.18□□□□□ -1.42
ZEB1-220ENST00000560909 FAM117AQ9C073 453 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 ABHD16BQ9H3Z7 469 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 AGO4Q9HCK5 861 aaKnown RBP6.18□□□□□ -1.42
ZEB1-220ENST00000560909 TBC1D22BQ9NU19 505 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 LMBRD1Q9NUN5 540 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 FLRT1Q9NZU1 646 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 VAV3Q9UKW4 847 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 PCDHA7Q9UN72 937 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 GABRQQ9UN88 632 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 CNPY2Q9Y2B0 182 aa6.18□□□□□ -1.42
ZEB1-220ENST00000560909 LCTP09848 1927 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 MEN1O00255 615 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 IPO5O00410 1097 aaKnown RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 FIBPO43427 364 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 CUTAO60888 179 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 ATP9AO75110 1047 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 ATG7O95352 703 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF865P0CJ78 1059 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 HSPA8P11142 646 aaKnown RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 HOXD8P13378 290 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 MCM4P33991 863 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 MCM7P33993 719 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 LONP1P36776 959 aaKnown RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 UBXN2AP68543 259 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 SP2Q02086 613 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 PRKCZQ05513 592 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 ITGB3BPQ13352 177 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 PPP2R5CQ13362 524 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 MTMR1Q13613 665 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 KIF22Q14807 665 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 STK38Q15208 465 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 CALCRLQ16602 461 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 PRR16Q569H4 304 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 HYIQ5T013 277 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 PPP2R2DQ66LE6 453 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 IQSEC1Q6DN90 963 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 RDM1Q8NG50 284 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 CD99L2Q8TCZ2 262 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 SCFD2Q8WU76 684 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 SPATA32Q96LK8 384 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 AK8Q96MA6 479 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 HSD17B14Q9BPX1 270 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 WDR11Q9BZH6 1224 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 CCSER1Q9C0I3 900 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 DDX41Q9UJV9 622 aaKnown RBP6.17□□□□□ -1.42
ZEB1-220ENST00000560909 HPSEQ9Y251 543 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 Q9Y3F1 56 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 MRVI1Q9Y6F6 885 aa6.17□□□□□ -1.42
ZEB1-220ENST00000560909 PLXNB2O15031 1838 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 IGKV6D-21A0A0A0MT36 114 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 C9orf172C9J069 976 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 NKRFO15226 690 aaKnown RBP eCLIP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 LYPLA2O95372 231 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ARIH2O95376 493 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 MYCLP12524 364 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 CYBAP13498 195 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ATP2B1P20020 1258 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 CYP2B6P20813 491 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 MUTP22033 750 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 UBA1P22314 1058 aaKnown RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 MARCKSP29966 332 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF76P36508 570 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 CD97P48960 835 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 UBE2HP62256 183 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 GRIN1Q05586 938 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ACVR2BQ13705 512 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 CCL14Q16627 93 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 DUSP28Q4G0W2 176 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 CELF3Q5SZQ8 465 aaKnown RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 WDR78Q5VTH9 848 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 RESP18Q5W5W9 173 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 ZNF746Q6NUN9 644 aaPredicted RBP6.16□□□□□ -1.42
ZEB1-220ENST00000560909 SHC4Q6S5L8 630 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 METTL7BQ6UX53 244 aa6.16□□□□□ -1.42
ZEB1-220ENST00000560909 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms