RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 OR8K1Q8NGG5 319 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 GOLGA5Q8TBA6 731 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 C16orf45Q96MC5 204 aaPredicted RBP14.21□□□□□ -0.14
SNX1-211ENST00000560829 METTL14Q9HCE5 456 aaKnown RBP14.21□□□□□ -0.14
SNX1-211ENST00000560829 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.14
SNX1-211ENST00000560829 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.14
SNX1-211ENST00000560829 TMEM150BA6NC51 233 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 KIF2AO00139 706 aaPredicted RBP14.2□□□□□ -0.14
SNX1-211ENST00000560829 ZSCAN12O43309 604 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 FARP2O94887 1054 aaPredicted RBP14.2□□□□□ -0.14
SNX1-211ENST00000560829 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
SNX1-211ENST00000560829 TUBB4AP04350 444 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 PGK2P07205 417 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 TRIM21P19474 475 aaKnown RBP14.2□□□□□ -0.14
SNX1-211ENST00000560829 GCLCP48506 637 aaPredicted RBP14.2□□□□□ -0.14
SNX1-211ENST00000560829 CCNA1P78396 465 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 ZBED6P86452 979 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 PRKCEQ02156 737 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 PTPN14Q15678 1187 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 XKR3Q5GH77 459 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 MKNK1Q9BUB5 465 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 GBP3Q9H0R5 595 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 C17orf75Q9HAS0 396 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 PDLIM7Q9NR12 457 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 DMAC2Q9NW81 257 aa14.2□□□□□ -0.14
SNX1-211ENST00000560829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX1-211ENST00000560829 DGAT1O75907 488 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 AKAP3O75969 853 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 TNNT1P13805 278 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 KLK7P49862 253 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 NCKAP1LP55160 1127 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 RTP1P59025 263 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 GTF2BQ00403 316 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 MEA1Q16626 185 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 CYP26C1Q6V0L0 522 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 RAD9BQ6WBX8 426 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 SLC9A9Q8IVB4 645 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 REXO1L1PQ8IX06 675 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 SMCR8Q8TEV9 937 aaPredicted RBP14.19□□□□□ -0.14
SNX1-211ENST00000560829 CEP170P1Q96L14 293 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 EDEM3Q9BZQ6 932 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 PORCNQ9H237 461 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 AGPAT3Q9NRZ7 376 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
SNX1-211ENST00000560829 ARMCX3Q9UH62 379 aaPredicted RBP14.19□□□□□ -0.14
SNX1-211ENST00000560829 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
SNX1-211ENST00000560829 GOLGA6L9A6NEM1 432 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 K7ENM7 598 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 TOGARAM2Q6ZUX3 1019 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 ABRAQ8N0Z2 381 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 KIFAP3Q92845 792 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 BORCS6Q96GS4 357 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 SH2D3AQ9BRG2 576 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 NTPCRQ9BSD7 190 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 GSTTP1A0A1W2PQM5 241 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 ATP4AP20648 1035 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 HNRNPH3P31942 346 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 SP4Q02446 784 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 KCNMA1Q12791 1236 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 MAEAQ7L5Y9 396 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 AFAP1L1Q8TED9 768 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 HVCN1Q96D96 273 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 GPRC5CQ9NQ84 441 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 ZNF302Q9NR11 478 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 CYP26B1Q9NR63 512 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 AGPAT5Q9NUQ2 364 aa14.18□□□□□ -0.14
SNX1-211ENST00000560829 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 R3HCC1Q9Y3T6 440 aaKnown RBP14.18□□□□□ -0.14
SNX1-211ENST00000560829 LRRC37A2A6NM11 1700 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 ASB14A6NK59 587 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 CLIC2O15247 247 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
SNX1-211ENST00000560829 PSMC2P35998 433 aaKnown RBP14.17□□□□□ -0.14
SNX1-211ENST00000560829 CDK17Q00537 523 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 MTF1Q14872 753 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 CST9Q5W186 159 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 HAUS6Q7Z4H7 955 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 ZNF397Q8NF99 534 aaPredicted RBP14.17□□□□□ -0.14
SNX1-211ENST00000560829 PCMTD1Q96MG8 357 aaPredicted RBP14.17□□□□□ -0.14
SNX1-211ENST00000560829 ACCSQ96QU6 501 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
SNX1-211ENST00000560829 ADGRG1Q9Y653 693 aa14.17□□□□□ -0.14
SNX1-211ENST00000560829 STRNO43815 780 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 GGPS1O95749 300 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms