RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 ITPRIPL1Q6GPH6 555 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SWSAP1Q6NVH7 229 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TLDC1Q6P9B6 456 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SHQ1Q6PI26 577 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 UNC5AQ6ZN44 842 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TRIM74Q86UV6 250 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TRIM73Q86UV7 250 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MAP4K3Q8IVH8 894 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 LMNTD2Q8IXW0 634 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 NUP133Q8WUM0 1156 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 TTC14Q96N46 770 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 CAMKK2Q96RR4 588 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PPP1R16BQ96T49 567 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 ABI2Q9NYB9 513 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SRPK3Q9UPE1 567 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PCDHGB2Q9Y5G2 931 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 F8W031 263 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 BAIAP3O94812 1187 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 C6orf222P0C671 652 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 GJB2P29033 226 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MAPK10P53779 464 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MPP2Q14168 576 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 DHCR24Q15392 516 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SKIDA1Q1XH10 827 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 CDCA2Q69YH5 1023 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 SULT6B1Q6IMI4 303 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 FCHSD1Q86WN1 690 aa7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 PTRH1Q86Y79 214 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 MRPL50Q8N5N7 158 aaKnown RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 C1orf162Q8NEQ5 155 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 NECAB3Q96P71 396 aaPredicted RBP7.41□□□□□ -1.22
TSPAN3-209ENST00000560715 VWA3AA6NCI4 1184 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 ZSCAN12O43309 604 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 LILRA1O75019 489 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 HSPA4P34932 840 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 RECQLP46063 649 aaPredicted RBP7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 TUBB4BP68371 445 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 PDE12Q6L8Q7 609 aaKnown RBP7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 ANKRD44Q8N8A2 993 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 APPL2Q8NEU8 664 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 MAGEC3Q8TD91 643 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 STK35Q8TDR2 534 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 ASB12Q8WXK4 309 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 ZBTB10Q96DT7 871 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 HOMER3Q9NSC5 361 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 KLC4Q9NSK0 619 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 TRMT13Q9NUP7 481 aaKnown RBP7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 MAP3K19Q56UN5 1328 aa7.4□□□□□ -1.22
TSPAN3-209ENST00000560715 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 P4HA2O15460 535 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 PRODHO43272 600 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 PPFIA2O75334 1257 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 VAMP4O75379 141 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 HOXD12P35452 270 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 SURF1Q15526 300 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 RC3H1Q5TC82 1133 aaKnown RBP7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 RUFY3Q7L099 469 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 RTL10Q7L3V2 364 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 MCM10Q7L590 875 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 TMC6Q7Z403 805 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 KIAA1328Q86T90 577 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 CMTR2Q8IYT2 770 aaKnown RBP7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 CAMKK1Q8N5S9 505 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 MAB21L3Q8N8X9 362 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 FGD4Q96M96 766 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 RIPOR3Q96MK2 946 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 SIL1Q9H173 461 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 VIPAS39Q9H9C1 493 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 ATP6V0A4Q9HBG4 840 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 NMRK2Q9NPI5 230 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 MBIPQ9NS73 344 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 ACAD8Q9UKU7 415 aa7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 PNMA8BQ9ULN7 279 aaPredicted RBP7.4□□□□□ -1.23
TSPAN3-209ENST00000560715 VPS37CA5D8V6 355 aaPredicted RBP7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 GOLGA6L9A6NEM1 432 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 K7ENM7 598 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 SYF2O95926 243 aaKnown RBP7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 DNTTP04053 509 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 TUBBP07437 444 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 RETSATQ6NUM9 610 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 TCP11Q8WWU5 503 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 SAAL1Q96ER3 474 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 RADILQ96JH8 1075 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 WDR24Q96S15 920 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 PNKPQ96T60 521 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 ZKSCAN3Q9BRR0 538 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 SUDS3Q9H7L9 328 aaPredicted RBP7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 EHMT1Q9H9B1 1298 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 CERS4Q9HA82 394 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 SUGCTQ9HAC7 445 aa7.39□□□□□ -1.23
TSPAN3-209ENST00000560715 LIN7BQ9HAP6 207 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms