RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	OSBP2	Q969R2	916 aa		5.77	□□□□□ -1.49
SLTM-223	ENST00000560532	PGBD4	Q96DM1	585 aa		5.77	□□□□□ -1.49
SLTM-223	ENST00000560532	CATSPERZ	Q9NTU4	200 aa		5.77	□□□□□ -1.49
SLTM-223	ENST00000560532	TRAF6	Q9Y4K3	522 aa		5.77	□□□□□ -1.49
SLTM-223	ENST00000560532	ERBB2	P04626	1255 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	NSMF	Q6X4W1	530 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	OSTM1	Q86WC4	334 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	ADGRG3	Q86Y34	549 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	SYNE4	Q8N205	404 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	ZNF276	Q8N554	614 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	PROKR1	Q8TCW9	393 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.76	□□□□□ -1.49	1e-8	■■□□□ 13.2
SLTM-223	ENST00000560532	ARHGEF4	Q9NR80	690 aa		5.76	□□□□□ -1.49
SLTM-223	ENST00000560532	MME	P08473	750 aa		5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	FGFR1	P11362	822 aa		5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	HERVK_113	P62684	666 aa		5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	IFRD2	Q12894	506 aa	Predicted RBP	5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	LENG9	Q96B70	501 aa		5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	ST7	Q9NRC1	585 aa		5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.75	□□□□□ -1.49
SLTM-223	ENST00000560532	PYGM	P11217	842 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	JAM2	P57087	298 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	PAK1	Q13153	545 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	PTPA	Q15257	358 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	RABL3	Q5HYI8	236 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	COLEC12	Q5KU26	742 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	RHOU	Q7L0Q8	258 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	BHLHA9	Q7RTU4	235 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	MTDH	Q86UE4	582 aa	Known RBP	5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	RPL10L	Q96L21	214 aa	Known RBP	5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	ZNF408	Q9H9D4	720 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	CBLC	Q9ULV8	474 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	XDH	P47989	1333 aa		5.74	□□□□□ -1.49
SLTM-223	ENST00000560532	GRID2IP	A4D2P6	1211 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	ABHD16A	O95870	558 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	ERCC5	P28715	1186 aa	Predicted RBP	5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	ST5	P78524	1137 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	LY6G5C	Q5SRR4	150 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	STRIP1	Q5VSL9	837 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	KCNV1	Q6PIU1	500 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	MB21D1	Q8N884	522 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	FBXW5	Q969U6	566 aa		5.73	□□□□□ -1.49
SLTM-223	ENST00000560532	KLRG2	A4D1S0	409 aa	Predicted RBP	5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	CD38	P28907	300 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	ADCY7	P51828	1080 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	HECTD2	Q5U5R9	776 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	FAM111B	Q6SJ93	734 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	CELF2-AS1	Q8N7Q2	184 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	ANKRD53	Q8N9V6	530 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	SGSM3	Q96HU1	749 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	GPHA2	Q96T91	129 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	TRPS1	Q9UHF7	1281 aa		5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.72	□□□□□ -1.49
SLTM-223	ENST00000560532	RBM8A	Q9Y5S9	174 aa	Known RBP	5.72	□□□□□ -1.49
SLTM-223	ENST00000560532		A0A0A6YYK5	440 aa	Predicted RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	PRAMEF22	A3QJZ6	481 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	KIAA0355	O15063	1070 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	NR4A1	P22736	598 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	RABGGTB	P53611	331 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	SMAD3	P84022	425 aa	Known RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	SEC23A	Q15436	765 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	OLFML1	Q6UWY5	402 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	BCL6B	Q8N143	479 aa	Predicted RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	HIPK4	Q8NE63	616 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	ASB15	Q8WXK1	588 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	SLC6A15	Q9H2J7	730 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	MAGEL2	Q9UJ55	1249 aa		5.71	□□□□□ -1.5
SLTM-223	ENST00000560532	TRAV20	A0A0B4J274	112 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	UBE2QL1	A1L167	161 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	GOLGA8B	A8MQT2	603 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	CLASP2	O75122	1294 aa	Known RBP	5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	ITGB1	P05556	798 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	SRGAP2C	P0DJJ0	459 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	BPIFB4	P59827	614 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	GNL2	Q13823	731 aa	Known RBP	5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	CRY1	Q16526	586 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	EPHA10	Q5JZY3	1008 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	KLHDC10	Q6PID8	442 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	LRRC55	Q6ZSA7	311 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	DPH6	Q7L8W6	267 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	BEND2	Q8NDZ0	799 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	MNT	Q99583	582 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	SYNPO2L	Q9H987	977 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	FZD1	Q9UP38	647 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	PCDHA8	Q9Y5H6	950 aa		5.7	□□□□□ -1.5
SLTM-223	ENST00000560532	IQCA1L	A6NCM1	817 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	ZNF561-AS1	K7EIQ3	104 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	WNT9A	O14904	365 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	CDK4	P11802	303 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	FKBP15	Q5T1M5	1219 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	PCDH19	Q8TAB3	1148 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	GCDH	Q92947	438 aa	Predicted RBP	5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	LPP	Q93052	612 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	ZNF428	Q96B54	188 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	GBP4	Q96PP9	640 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms