RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, human

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG11-222	ENST00000560435	CBLC	Q9ULV8	474 aa		4.68	□□□□□ -1.66
SPG11-222	ENST00000560435	TRAF6	Q9Y4K3	522 aa		4.68	□□□□□ -1.66
SPG11-222	ENST00000560435	ARVCF	O00192	962 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	MME	P08473	750 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	FGR	P09769	529 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	ADCY7	P51828	1080 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	ADAM15	Q13444	863 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	CRY1	Q16526	586 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	LRRC47	Q8N1G4	583 aa	Known RBP	4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	SLC6A15	Q9H2J7	730 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	ST7	Q9NRC1	585 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	PTGFRN	Q9P2B2	879 aa		4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.67	□□□□□ -1.66
SPG11-222	ENST00000560435	MFAP1	P55081	439 aa	Known RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	SESN2	P58004	480 aa	Predicted RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	SEC23A	Q15436	765 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	GSPT2	Q8IYD1	628 aa	Known RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	BCL6B	Q8N143	479 aa	Predicted RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	ASB15	Q8WXK1	588 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	GPR87	Q9BY21	358 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	SMURF1	Q9HCE7	757 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	PACSIN3	Q9UKS6	424 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	PCDHA8	Q9Y5H6	950 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	XDH	P47989	1333 aa		4.66	□□□□□ -1.66
SPG11-222	ENST00000560435	GSTA4	O15217	222 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	FAM20B	O75063	409 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	NAT1	P18440	290 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	APEX1	P27695	318 aa	Known RBP	4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	STAT3	P40763	770 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	C21orf58	P58505	322 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	SMAD3	P84022	425 aa	Known RBP	4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	ATP2C1	P98194	919 aa	Predicted RBP	4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	MAP3K12	Q12852	859 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	ELAVL1	Q15717	326 aa	Known RBP	4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	RABL3	Q5HYI8	236 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	KLHDC10	Q6PID8	442 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	HTR3D	Q70Z44	454 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	SYNE4	Q8N205	404 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	CALML6	Q8TD86	181 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	NTN5	Q8WTR8	489 aa	Predicted RBP	4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	PTPRN2	Q92932	1015 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	RIOX1	Q9H6W3	641 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	TRPS1	Q9UHF7	1281 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	ZNHIT2	Q9UHR6	403 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	ASB1	Q9Y576	335 aa		4.65	□□□□□ -1.67
SPG11-222	ENST00000560435	PRAMEF22	A3QJZ6	481 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	KLRG2	A4D1S0	409 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	MASP2	O00187	686 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	KCNK3	O14649	394 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	RABGGTB	P53611	331 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	KRTAP10-11	P60412	298 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	ADAM8	P78325	824 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	LACTB	P83111	547 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	FAM47C	Q5HY64	1035 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	SYCE2	Q6PIF2	218 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	FAM111B	Q6SJ93	734 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	GAREM2	Q75VX8	874 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	VRK3	Q8IV63	474 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	NOSTRIN	Q8IVI9	506 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	ZNF276	Q8N554	614 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	GBP4	Q96PP9	640 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	GPHA2	Q96T91	129 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	FZD1	Q9UP38	647 aa		4.64	□□□□□ -1.67
SPG11-222	ENST00000560435	CCDC66	A2RUB6	948 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	GRID2IP	A4D2P6	1211 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	ZAR1L	A6NP61	321 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	FOXP2	O15409	715 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	PPFIA4	O75335	1185 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	H2AFY	O75367	372 aa	Known RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	GUCY1A3	Q02108	690 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	GNL2	Q13823	731 aa	Known RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	LY6G5C	Q5SRR4	150 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	ZKSCAN2	Q63HK3	967 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	HIPK4	Q8NE63	616 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	GFM2	Q969S9	779 aa	Known RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	ZNF669	Q96BR6	464 aa	Predicted RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	BBC3	Q96PG8	261 aa	Predicted RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	MLST8	Q9BVC4	326 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	ADARB2	Q9NS39	739 aa	Known RBP	4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	KCNH7	Q9NS40	1196 aa		4.63	□□□□□ -1.67
SPG11-222	ENST00000560435	GOLGA6L6	A8MZA4	724 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	ITGB1	P05556	798 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	SRGAP2C	P0DJJ0	459 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	SDHA	P31040	664 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	ACAP1	Q15027	740 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	PTPA	Q15257	358 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	GAGE13	Q4V321	117 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	TM4SF20	Q53R12	229 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	COLEC12	Q5KU26	742 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	LRRC55	Q6ZSA7	311 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	ANKS3	Q6ZW76	656 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	ANKRD53	Q8N9V6	530 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	PROKR1	Q8TCW9	393 aa		4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	THAP3	Q8WTV1	239 aa	Predicted RBP	4.62	□□□□□ -1.67
SPG11-222	ENST00000560435	GCDH	Q92947	438 aa	Predicted RBP	4.62	□□□□□ -1.67

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