RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CHP1Q99653 195 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ABHD10Q9NUJ1 306 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 TRAF3IP3Q9Y228 551 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.97□□□□□ -0.495e-8■□□□□ 11.1
SNRPA1-211ENST00000560433 CETN3O15182 167 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 LYPLA2O95372 231 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 FGFR1OPO95684 399 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ICAM3P32942 547 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 FKBP15Q5T1M5 1219 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 TCERG1LQ5VWI1 586 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 SYCP3Q8IZU3 236 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 KCTD17Q8N5Z5 321 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ZBTB10Q96DT7 871 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 PCYT2Q99447 389 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 MROH8Q9H579 483 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 ITIH6Q6UXX5 1313 aa11.97□□□□□ -0.49
SNRPA1-211ENST00000560433 PDXKO00764 312 aa11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 TCF7P36402 384 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 TMEM143Q96AN5 459 aa11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 KCND2Q9NZV8 630 aa11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 DDX41Q9UJV9 622 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNRPA1-211ENST00000560433 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 NRDCO43847 1150 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 TPM1P09493 284 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 PLS3P13797 630 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 TNNT1P13805 278 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 FKBP1BP68106 108 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 KCNMA1Q12791 1236 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 ARMCX2Q7L311 632 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 OTUD6AQ7L8S5 288 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.5
SNRPA1-211ENST00000560433 DOCK3Q8IZD9 2030 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 A0A1W2PQC6 194 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 KCNH2Q12809 1159 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 CNGA4Q8IV77 575 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 CCDC112Q8NEF3 446 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 CEP63Q96MT8 703 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 ANKEF1Q9NU02 776 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 STX10O60499 249 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 NPTX2P47972 431 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 RDM1Q8NG50 284 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 PANX2Q96RD6 677 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 GBP3Q9H0R5 595 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 NLRC4Q9NPP4 1024 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 AGPAT3Q9NRZ7 376 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 TFR2Q9UP52 801 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 MAFBQ9Y5Q3 323 aaPredicted RBP11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 IVNS1ABPQ9Y6Y0 642 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 ADGRA3Q8IWK6 1321 aa11.95□□□□□ -0.5
SNRPA1-211ENST00000560433 HTTP42858 3142 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PPP1R37O75864 691 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ATG7O95352 703 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ABL1P00519 1130 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ZBTB48P10074 688 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ACTN1P12814 892 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 STAT5BP51692 787 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 CCNA1P78396 465 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 DRP2Q13474 957 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 NEDD9Q14511 834 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 DPP9Q86TI2 863 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 SAPCD2Q86UD0 394 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 GLG1Q92896 1179 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 IGSF9BQ9UPX0 1349 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
SNRPA1-211ENST00000560433 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms